bioconda-builder command line from the Dev Guide doesn't work as shown

[simonvh]

I'm not sure if it's me, but the following command from the Developer Guide doesn't work for me:

docker run -v `pwd`:/bioconda-recipes bioconda/bioconda-builder --packages your_package --env-matrix scripts/env_matrix.yml

However, it does work like this:

docker run -v `pwd`:/bioconda-recipes bioconda/bioconda-builder --packages your_package --env-matrix /bioconda-recipes/scripts/env_matrix.yml

Anything I miss here?

[acaprez]

Nope, I had the same issue. It's because the docker instance starts with / as the current working directory, and the repo is mounted at /bioconda-recipes inside of it. So you have to prepend /bioconda-recipes for the path to be correct.

[daler]

Thanks, I updated the README to fix this.