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Update el_gato version to 1.20.1 (#51484)
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* bump version to 1.20.0 and (hopefully) fix build issues in #51051

* try noarch python

* build noarch generic but try skipping noarch lint

* add new 1.20.1 release
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Alan-Collins authored Oct 18, 2024
1 parent 0249a46 commit 6a8bc71
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Showing 2 changed files with 21 additions and 13 deletions.
6 changes: 0 additions & 6 deletions recipes/el_gato/build.sh

This file was deleted.

28 changes: 21 additions & 7 deletions recipes/el_gato/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,10 +1,10 @@
{% set name = "el_gato" %}
{% set version = "1.19.0" %}
{% set hash = "ad390572ce785707b67a00f25978c4032981ac7e6149ddc423443e9189b30e75" %}
{% set version = "1.20.1" %}
{% set hash = "3c19594caa7aff4d1fee7a844f645c640b08adbb9fc9926439ab2c2891c88de9" %}
{% set user = "appliedbinf" %}

package:
name: el_gato
name: {{ name }}
version: {{ version }}

source:
Expand All @@ -14,14 +14,19 @@ source:
build:
number: 0
noarch: generic
script:
- mkdir -p $PREFIX/bin/db
- cp -rf el_gato/db/* $PREFIX/bin/db/
- {{ PYTHON }} -m pip install . -vvv --no-deps --no-build-isolation --no-cache-dir
run_exports:
- {{ pin_subpackage(name, max_pin='x.x') }}
- {{ pin_subpackage(name, max_pin='x') }}

requirements:
build:
- python
host:
- python >=3.8,<3.12
- pip
- setuptools
run:
- python >=3.8,<3.12
- minimap2 >=2.24
Expand All @@ -31,13 +36,22 @@ requirements:
- nextflow
- fpdf2
- packaging
- colorama # [linux]
- importlib-metadata # [py <= 38]

extra:
skip-lints:
- should_be_noarch_python # database files aren't found properly when built with noarch: python

test:
commands:
- el_gato.py --version

about:
home: https://github.com/{{ user }}/{{ name }}
home: "https://github.com/{{ user }}/{{ name }}"
license: MIT
license_family: MIT
license_file: LICENSE
summary: Perform Legionella pneumophila Sequence Based Typing (SBT) from short reads or assemblies
summary: "Perform Legionella pneumophila Sequence Based Typing (SBT) from short reads or assemblies."
dev_url: "https://github.com/{{ user }}/{{ name }}"
doc_url: "https://github.com/appliedbinf/el_gato/blob/{{ version }}/README.md"

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