delly: pin boost-cpp (#48756)

* pin boost-cpp

* whitespace

* Don't override CXXFLAGS

Overriding this variable as a make argument suppresses CXXFLAGS settings
from both conda-build's environment variable and delly's Makefile. As we
override CXX to use conda's compiler, it will look in $PREFIX/include and
$PREFIX/lib anyway, so adding those explicitly is unnecessary.

In particular, delly's Makefile sets -std=c++11, which will prevent the
build failures due to std::binary_function that are being encountered.

Also use upstream's "make install" target instead of manually copying.

* Remove run requirements in favour of those implied via run_exports

These libraries will add appropriate dependencies themselves via
their run_exports. Apparently libboost needs to be listed though.

---------

Co-authored-by: John Marshall <jmarshall@hey.com>

recipes/delly/build.sh

@@ -1,5 +1,4 @@
 #!/bin/sh
 
-mkdir -p "${PREFIX}/bin"
-make all CXX=$CXX CXXFLAGS="-I${PREFIX}/include -L${PREFIX}/lib"
-cp src/delly "${PREFIX}/bin"
+make CXX="$CXX" all
+make prefix="$PREFIX" install

recipes/delly/meta.yaml

@@ -10,7 +10,7 @@ source:
   sha256: '{{ sha256 }}'
 
 build:
-  number: 2
+  number: 3
   run_exports:
     - {{ pin_subpackage("delly", max_pin="x.x") }}
 
@@ -21,14 +21,10 @@ requirements:
     - wget
   host:
     - zlib
-    - bzip2
-    - boost-cpp
+    - boost-cpp >=1.85.0
     - htslib
   run:
-    - zlib
-    - bzip2
-    - boost-cpp
-    - htslib
+    - libboost >=1.85.0
 
 test:
   commands: