Update build.sh

bioconda · Sep 27, 2024 · 15006dd · 15006dd
1 parent fe19494
commit 15006dd
Showing 1 changed file with 8 additions and 3 deletions.
diff --git a/recipes/pantax/build.sh b/recipes/pantax/build.sh
@@ -3,16 +3,21 @@
 if [ "$(uname)" == "Darwin" ]; then
     cp -rf $SRC_DIR $PREFIX
 else
-    cd gurobi11
+    cd ${PREFIX}/gurobi11
     ${PYTHON} -m pip install gurobipy-11.0.2-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.whl
     rm gurobipy-11.0.2-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.whl
+
     mkdir -p ${PREFIX}/bin/tools
-    cd ../vg
+    cd ${PREFIX}/vg
     cp vg* ${PREFIX}/bin/tools/vg
+    chmod +x ${PREFIX}/bin/tools/vg
+
     cd $SRC_DIR/scripts
     chmod +x pantax
-    cp $SRC_DIR/scripts/pantax ${PREFIX}/bin
+    chmod +x data_preprocessing
+    cp $SRC_DIR/scripts/pantax $SRC_DIR/scripts/data_preprocessing ${PREFIX}/bin
     cp $SRC_DIR/scripts/*py ${PREFIX}/bin
+
     cd $SRC_DIR/tools/fastix
     cargo install fastix --root ./
     cp $SRC_DIR/tools/fastix/bin/fastix ${PREFIX}/bin/tools