Merge branch 'main' into remove_python2_legacy

.mailmap

@@ -0,0 +1,11 @@
+# This is used by Git to consolidate the users who used multiple accounts
+# I pick the account with the most modified files in git shortlog -sne
+Reece Hart <reecehart@gmail.com> Reece Hart <reece@biocommons.org>
+Reece Hart <reecehart@gmail.com> Reece Hart <reece@biocmmons.org>
+Rudy Rico <rudy.rico@invitae.com> Rudolph Rico <rudy.rico@invitae.com>
+Meng <wangm0855@gmail.com> Meng Wang <wangm0855@gmail.com>
+Andreas Prlic <andreas.prlic@invitae.com> Andreas Prlic <andreas.prlic@gmail.com>
+Andreas Prlic <andreas.prlic@invitae.com> Andreas Prlic <36012160+andreas-invitae@users.noreply.github.com>
+Caitlin Gong <ccaitlingo@gmail.com> Caitlin Gong <clgong@vassar.edu>
+Katie Stahl <kathryn.stahl@nationwidechildrens.org> katie stahl <kathryn.stahl@nationwidechildrens.org>
+Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de> Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>

AUTHORS

@@ -1,35 +1,48 @@
-Contributors are listed in the Mercurial change logs.  From the
-command line:
+Contributors are listed in the Git change logs. From the command line:
 
 $ git shortlog -sne
-  1049	Reece Hart <reecehart@gmail.com>
-   151	Meng <wangm0855@gmail.com>
-   116	Rudy Rico <rudy.rico@invitae.com>
-    39	Vincent Fusaro <vincent.fusaro@invitae.com>
-    20	Meng Wang <wangm0855@gmail.com>
-    19	Lucas Wiman <lucas.wiman@gmail.com>
-     9	Piotr Kaleta <piotrek.kaleta@gmail.com>
-     5	Alexandre Fedtsov <shmumer@users.noreply.github.com>
-     3	Dimitris Iliopoulos <diliopoulos@pacificbiosciences.com>
-     3	Kevin Jacobs <jacobs@bioinformed.com>
-     2	Alan Rubin <alan.rubin@wehi.edu.au>
-     2	Emanuel Langit <emanuel.langit@fastmail.fm>
-     2	Jai Pradeesh <jaipradeesh@gmail.com>
-     2	Jake Peacock <james.hoke.peacock@gmail.com>
-     1	Andreas Prlic <36012160+andreas-invitae@users.noreply.github.com>
-     1	Andreas Prlic <andreas.prlic@gmail.com>
-     1	Andy McMurry (AndyMC) <andymc@apache.org>
-     1	Clayton Wheeler <cwheeler@genomenon.com>
-     1	Daniel Saxton <dsaxton@protonmail.com>
-     1	John Kern <kern3020@gmail.com>
-     1	Keith Callenberg <keithcallenberg@users.noreply.github.com>
-     1	Kevin McCurdy <khmccurdy@aol.com>
-     1	Lawrence Lee <lawrence.lee@invitae.com>
-     1	Liang Chen <chenliangomc@users.noreply.github.com>
-     1	Naomi Fox <naomi.fox@gmail.com>
-     1	Rudolph Rico <rudy.rico@invitae.com>
-     1	Sandeep Narayanaswami <scoffes@gmail.com>
-     1	Timothy Laurent <timothy.laurent@invitae.com>
+  1161  Reece Hart <reecehart@gmail.com>
+   171  Meng <wangm0855@gmail.com>
+   117  Rudy Rico <rudy.rico@invitae.com>
+    39  Vincent Fusaro <vincent.fusaro@invitae.com>
+    38  Dave Lawrence <davmlaw@gmail.com>
+    33  Katie Stahl <kathryn.stahl@nationwidechildrens.org>
+    19  Lucas Wiman <lucas.wiman@gmail.com>
+    19  Robert Queenin <2177841+ecalifornica@users.noreply.github.com>
+     9  Piotr Kaleta <piotrek.kaleta@gmail.com>
+     6  Andreas Prlic <andreas.prlic@invitae.com>
+     5  Alexandre Fedtsov <shmumer@users.noreply.github.com>
+     4  James Stevenson <james.sharpsteen@gmail.com>
+     3  Dimitris Iliopoulos <diliopoulos@pacificbiosciences.com>
+     3  Kevin Jacobs <jacobs@bioinformed.com>
+     3  Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>
+     3  jdasilva-invitae <jhonatan.dasilva@invitae.com>
+     2  Alan Rubin <alan.rubin@wehi.edu.au>
+     2  Caitlin Gong <ccaitlingo@gmail.com>
+     2  Emanuel Langit <emanuel.langit@fastmail.fm>
+     2  Jai Pradeesh <jaipradeesh@gmail.com>
+     2  Jake Peacock <james.hoke.peacock@gmail.com>
+     2  Jay <22547630+jPleyte@users.noreply.github.com>
+     1  Alex H. Wagner, PhD <Alex.Wagner@nationwidechildrens.org>
+     1  Alex Henrie <alexhenrie24@gmail.com>
+     1  Andy McMurry (AndyMC) <andymc@apache.org>
+     1  Ben Robinson <bmrobin9823@gmail.com>
+     1  Brendan O'Donnell <1258849+b0d0nne11@users.noreply.github.com>
+     1  Clayton Wheeler <cwheeler@genomenon.com>
+     1  Daniel Saxton <dsaxton@protonmail.com>
+     1  David Cain <davidjosephcain@gmail.com>
+     1  Jeff Tratner <jeffrey.tratner@gmail.com>
+     1  John Kern <kern3020@gmail.com>
+     1  Keith Callenberg <keithcallenberg@users.noreply.github.com>
+     1  Kevin McCurdy <khmccurdy@aol.com>
+     1  Kori Kuzma <42851808+korikuzma@users.noreply.github.com>
+     1  Lawrence Lee <lawrence.lee@invitae.com>
+     1  Liang Chen <chenliangomc@users.noreply.github.com>
+     1  Naomi Fox <naomi.fox@gmail.com>
+     1  Sandeep Narayanaswami <scoffes@gmail.com>
+     1  The Gitter Badger <badger@gitter.im>
+     1  Timothy Laurent <timothy.laurent@invitae.com>
+     1  pjcoenen <64436780+pjcoenen@users.noreply.github.com>
 
 
 Additional non-coding contributors are:
@@ -40,3 +53,5 @@ Additional non-coding contributors are:
   John Garcia
   Kevin Jacobs
   Veena Rajaraman
+
+NOTE: .mailmap is used to assign a single account to users who used different git emails