ngs_te_mapper2 v1.0.2

• ngs_te_mapper2 is now packaged and published to Pypi (see https://pypi.org/project/ngs-te-mapper2/1.0.2/).

ngs_te_mapper2 v1.0.1

• User can now optionally provide GFF3 file to bypass RepeatMasker compute and speed up the program.
• Minor bug fix on the GFF coordinate.

ngs_te_mapper2 v1.0

ngs_te_mapper2 is a re-implementation of the method for detecting transposable element (TE) insertions from next-generation sequencing (NGS) data originally described in Linheiro and Bergman (2012) PLoS ONE 7(2): e30008. See detail of the method and usage in https://github.com/bergmanlab/ngs_te_mapper2/blob/main/README.md.