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Achievement: Starstruck

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aycibatuhan/README.md

Hi, I'm Batuhan Ayci 👋

MD, postdoctoral fellow in neuroimmunology and advanced MRI at the Icahn School of Medicine at Mount Sinai (Beck's Lab, Department of Neurology).

My research focuses on multiple sclerosis, neuroimmunology, and advanced MRI markers of inflammatory demyelinating disease — cortical lesions, paramagnetic rim lesions, and quantitative MRI at 3T and 7T.

🔬 Research

  • Cortical lesions and their role in early multiple sclerosis
  • Paramagnetic rim lesions and cognitive outcomes
  • Deep learning for MS lesion segmentation and cortical lesion detection
  • Imaging vs. serum biomarkers in MS disability and progression

🛠️ Projects

  • nervous-system-atlas — browser-based 3D atlas of clinical neuroanatomy in MNI152 space: 592 meshes, synchronised MRI slices, arterial territories, traced pathways, syndrome/lesion mode, glossary and quiz (EN/TR)
  • tusopen — open-source TUS (Turkish medical specialty exam) study system: structured content DB → Anki deck + case simulator
  • LedgerBar — local-first envelope budgeting for macOS (SwiftUI + SQLite, no cloud)
  • skincare — offline-first skincare routine tracker (PWA + single-file HTML + macOS app)
  • yks-takip — offline-first YKS prep tracker for Android tablets
  • whispr — personal project

📫 Find me

☕ Support

If you find my work useful, you can buy me a coffee!

Popular repositories Loading

  1. nervous-system-atlas nervous-system-atlas Public

    A browser-based 3D atlas of clinical neuroanatomy in MNI152 space: 592 meshes with synchronised MRI slices, arterial territories, traced pathways, a syndrome and lesion mode, clinical topics, a glo…

    Python 46 13

  2. tusopen tusopen Public

    Açık kaynak TUS çalışma sistemi: yapılandırılmış içerik DB → Anki destesi + vaka simülatörü

    Python 4

  3. LedgerBar LedgerBar Public

    A local-first, zero-based envelope budgeting app for macOS (native SwiftUI) that imports read-only bank data from SimpleFIN Bridge and stores everything in one local SQLite file. No telemetry, no c…

    Swift 1

  4. skincare skincare Public

    Personal skincare routine tracker: morning/evening checklists, retinal phase transitions, symptom log for your dermatologist, product inventory. PWA + single-file HTML + native macOS app. Offline-f…

    JavaScript 1

  5. whispr whispr Public

    Rust

  6. yks-takip yks-takip Public

    Çevrimdışı-öncelikli YKS hazırlık takip uygulaması: deneme analizi, haftalık plan, odak sayacı, konu takibi ve BYOK yapay zekâ koçu. Offline-first YKS prep tracker for Android tablets.

    Kotlin