Plugins #42
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Plugins #42
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Conflicts: src/main/java/com/askimed/nf/test/lang/TestSuiteBuilder.java src/main/java/com/askimed/nf/test/util/FileUtil.java
Conflicts: mkdocs.yml src/main/java/com/askimed/nf/test/lang/extensions/PathExtension.java src/main/java/com/askimed/nf/test/util/FileUtil.java
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Most assertions are usecase specific. Fo example bioinformatics (#20,#19), tables (#22) or image processing (#33). Therefore, separating this functionality and helper classes from the nf-test codebase has several advantages:
This pull request integrates a plugin system that provides (a) the possibility to extend existing classes with custom methods (e.g.
path(filename).fasta) and (2) to extends nf-test with new methods.The FASTA file-format is the first plugin. It can be found here https://github.com/askimed/nft-fasta and can be used as a boilerplate for plugins that provide support for VCFs, tables or images.