…t since it shows the read length neighborhood where most data is concentrated if such a neighborhood exists (they exist for pacbio reads, but the plot seems more uniform with minION reads). This is the type of plot one sees in MinKNOW during the sequencing run. poretools/poretool_main.py was edited to include this subcommand and poretools/dataconc.py was added to the repertoire. dataconc.py uses the matplotlib and pandas libraries and is a surprisingly simple few lines of code.

… data as a percent of all data. The other is --cumulative which plots the cumulative data with increasing read length. --percent and --cumulative can be used together as well.

…tration plots would look like with uniform sampling of read lengths

… types, time constraints, etc. Simulation also updated to reflect these changes where relevant.

…Plot