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@arpcard

Comprehensive Antibiotic Resistance Database

Software, Curation, and Data for the Comprehensive Antibiotic Resistance Database. Contributions welcome!

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  1. rgi rgi Public

    Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

    Python 395 82

  2. CARPDM CARPDM Public

    Comprehensive Antibiotic Resistance Probe Design Machine (CARPDM) for design of hybridization probes based on CARD reference sequences.

    Python 3 1

  3. amr_curation amr_curation Public

    A public repository for collective curation of antimicrobial resistance (AMR) genes and mutations. Submit, discuss, and resolve AMR curation issues.

    63 7

  4. aro aro Public

    The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of an antibiotic. It reflects the latest curation at CARD.

    Makefile 20 7

  5. FAQ FAQ Public

    Frequently asked questions for CARD, RGI, and ARO.

    3 1

  6. aro-next aro-next Public

    The next major phase of ARO development has begun, addressing issues of orthogonality and fundamental ontological design. ARO Next development is independent of ongoing curation at CARD.

    3

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