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some documentation added
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arontommi committed Jan 12, 2018
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34 changes: 17 additions & 17 deletions .idea/workspace.xml

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8 changes: 6 additions & 2 deletions Readme.md
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##### this is a simple wrapper around samtools to subset bam files to later view in Igv for less command line literate people for visual validation of variants.
#### this is a simple wrapper around samtools to subset bam files to later view in Igv for less command line literate people for visual validation of variants.

additional objects are for the writer to improve software documentasion as well as use click to manage inputs

The idea is to continue to add functionality, ideally being able
it is possible to run multiple files by using a simple headerless csv

##### example of csv :

inputfile,region,outputfile

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