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[SPARK-6953] [PySpark] speed up python tests #5427

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[SPARK-6953] [PySpark] speed up python tests #5427

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be23e1d
speed up python tests
Apr 8, 2015
0c49785
Update tests.py
Apr 8, 2015
5fb17db
Merge branch 'master' of github.com:apache/spark into python_tests
Apr 13, 2015
5ab44f6
Merge branch 'master' of github.com:apache/spark into python_tests
Apr 15, 2015
efa9c39
speed tests.py, and reduce logging
Apr 15, 2015
fec2da2
Merge branch 'python_tests' of github.com:davies/spark into python_tests
Apr 15, 2015
945a2b5
show total time
Apr 16, 2015
28fde53
Merge branch 'master' of github.com:apache/spark into python_tests
Apr 16, 2015
55bb451
increase the timeout for kafka test
Apr 16, 2015
aa39c55
Merge branch 'master' of github.com:apache/spark into python_tests
Apr 16, 2015
2654bfd
fix tests in python3
Apr 17, 2015
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17 changes: 9 additions & 8 deletions python/pyspark/mllib/classification.py
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Original file line number Diff line number Diff line change
Expand Up @@ -86,7 +86,7 @@ class LogisticRegressionModel(LinearClassificationModel):
... LabeledPoint(0.0, [0.0, 1.0]),
... LabeledPoint(1.0, [1.0, 0.0]),
... ]
>>> lrm = LogisticRegressionWithSGD.train(sc.parallelize(data))
>>> lrm = LogisticRegressionWithSGD.train(sc.parallelize(data), iterations=10)
>>> lrm.predict([1.0, 0.0])
1
>>> lrm.predict([0.0, 1.0])
Expand All @@ -95,15 +95,15 @@ class LogisticRegressionModel(LinearClassificationModel):
[1, 0]
>>> lrm.clearThreshold()
>>> lrm.predict([0.0, 1.0])
0.123...
0.279...

>>> sparse_data = [
... LabeledPoint(0.0, SparseVector(2, {0: 0.0})),
... LabeledPoint(1.0, SparseVector(2, {1: 1.0})),
... LabeledPoint(0.0, SparseVector(2, {0: 1.0})),
... LabeledPoint(1.0, SparseVector(2, {1: 2.0}))
... ]
>>> lrm = LogisticRegressionWithSGD.train(sc.parallelize(sparse_data))
>>> lrm = LogisticRegressionWithSGD.train(sc.parallelize(sparse_data), iterations=10)
>>> lrm.predict(array([0.0, 1.0]))
1
>>> lrm.predict(array([1.0, 0.0]))
Expand All @@ -129,7 +129,8 @@ class LogisticRegressionModel(LinearClassificationModel):
... LabeledPoint(1.0, [1.0, 0.0, 0.0]),
... LabeledPoint(2.0, [0.0, 0.0, 1.0])
... ]
>>> mcm = LogisticRegressionWithLBFGS.train(data=sc.parallelize(multi_class_data), numClasses=3)
>>> data = sc.parallelize(multi_class_data)
>>> mcm = LogisticRegressionWithLBFGS.train(data, iterations=10, numClasses=3)
>>> mcm.predict([0.0, 0.5, 0.0])
0
>>> mcm.predict([0.8, 0.0, 0.0])
Expand Down Expand Up @@ -298,7 +299,7 @@ def train(cls, data, iterations=100, initialWeights=None, regParam=0.01, regType
... LabeledPoint(0.0, [0.0, 1.0]),
... LabeledPoint(1.0, [1.0, 0.0]),
... ]
>>> lrm = LogisticRegressionWithLBFGS.train(sc.parallelize(data))
>>> lrm = LogisticRegressionWithLBFGS.train(sc.parallelize(data), iterations=10)
>>> lrm.predict([1.0, 0.0])
1
>>> lrm.predict([0.0, 1.0])
Expand Down Expand Up @@ -330,22 +331,22 @@ class SVMModel(LinearClassificationModel):
... LabeledPoint(1.0, [2.0]),
... LabeledPoint(1.0, [3.0])
... ]
>>> svm = SVMWithSGD.train(sc.parallelize(data))
>>> svm = SVMWithSGD.train(sc.parallelize(data), iterations=10)
>>> svm.predict([1.0])
1
>>> svm.predict(sc.parallelize([[1.0]])).collect()
[1]
>>> svm.clearThreshold()
>>> svm.predict(array([1.0]))
1.25...
1.44...

>>> sparse_data = [
... LabeledPoint(0.0, SparseVector(2, {0: -1.0})),
... LabeledPoint(1.0, SparseVector(2, {1: 1.0})),
... LabeledPoint(0.0, SparseVector(2, {0: 0.0})),
... LabeledPoint(1.0, SparseVector(2, {1: 2.0}))
... ]
>>> svm = SVMWithSGD.train(sc.parallelize(sparse_data))
>>> svm = SVMWithSGD.train(sc.parallelize(sparse_data), iterations=10)
>>> svm.predict(SparseVector(2, {1: 1.0}))
1
>>> svm.predict(SparseVector(2, {0: -1.0}))
Expand Down
25 changes: 15 additions & 10 deletions python/pyspark/mllib/regression.py
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Original file line number Diff line number Diff line change
Expand Up @@ -108,7 +108,8 @@ class LinearRegressionModel(LinearRegressionModelBase):
... LabeledPoint(3.0, [2.0]),
... LabeledPoint(2.0, [3.0])
... ]
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), initialWeights=np.array([1.0]))
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), iterations=10,
... initialWeights=np.array([1.0]))
>>> abs(lrm.predict(np.array([0.0])) - 0) < 0.5
True
>>> abs(lrm.predict(np.array([1.0])) - 1) < 0.5
Expand All @@ -135,12 +136,13 @@ class LinearRegressionModel(LinearRegressionModelBase):
... LabeledPoint(3.0, SparseVector(1, {0: 2.0})),
... LabeledPoint(2.0, SparseVector(1, {0: 3.0}))
... ]
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), initialWeights=array([1.0]))
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), iterations=10,
... initialWeights=array([1.0]))
>>> abs(lrm.predict(array([0.0])) - 0) < 0.5
True
>>> abs(lrm.predict(SparseVector(1, {0: 1.0})) - 1) < 0.5
True
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), iterations=100, step=1.0,
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), iterations=10, step=1.0,
... miniBatchFraction=1.0, initialWeights=array([1.0]), regParam=0.1, regType="l2",
... intercept=True, validateData=True)
>>> abs(lrm.predict(array([0.0])) - 0) < 0.5
Expand Down Expand Up @@ -238,7 +240,7 @@ class LassoModel(LinearRegressionModelBase):
... LabeledPoint(3.0, [2.0]),
... LabeledPoint(2.0, [3.0])
... ]
>>> lrm = LassoWithSGD.train(sc.parallelize(data), initialWeights=array([1.0]))
>>> lrm = LassoWithSGD.train(sc.parallelize(data), iterations=10, initialWeights=array([1.0]))
>>> abs(lrm.predict(np.array([0.0])) - 0) < 0.5
True
>>> abs(lrm.predict(np.array([1.0])) - 1) < 0.5
Expand All @@ -265,12 +267,13 @@ class LassoModel(LinearRegressionModelBase):
... LabeledPoint(3.0, SparseVector(1, {0: 2.0})),
... LabeledPoint(2.0, SparseVector(1, {0: 3.0}))
... ]
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), initialWeights=array([1.0]))
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), iterations=10,
... initialWeights=array([1.0]))
>>> abs(lrm.predict(np.array([0.0])) - 0) < 0.5
True
>>> abs(lrm.predict(SparseVector(1, {0: 1.0})) - 1) < 0.5
True
>>> lrm = LassoWithSGD.train(sc.parallelize(data), iterations=100, step=1.0,
>>> lrm = LassoWithSGD.train(sc.parallelize(data), iterations=10, step=1.0,
... regParam=0.01, miniBatchFraction=1.0, initialWeights=array([1.0]), intercept=True,
... validateData=True)
>>> abs(lrm.predict(np.array([0.0])) - 0) < 0.5
Expand Down Expand Up @@ -321,7 +324,8 @@ class RidgeRegressionModel(LinearRegressionModelBase):
... LabeledPoint(3.0, [2.0]),
... LabeledPoint(2.0, [3.0])
... ]
>>> lrm = RidgeRegressionWithSGD.train(sc.parallelize(data), initialWeights=array([1.0]))
>>> lrm = RidgeRegressionWithSGD.train(sc.parallelize(data), iterations=10,
... initialWeights=array([1.0]))
>>> abs(lrm.predict(np.array([0.0])) - 0) < 0.5
True
>>> abs(lrm.predict(np.array([1.0])) - 1) < 0.5
Expand All @@ -348,12 +352,13 @@ class RidgeRegressionModel(LinearRegressionModelBase):
... LabeledPoint(3.0, SparseVector(1, {0: 2.0})),
... LabeledPoint(2.0, SparseVector(1, {0: 3.0}))
... ]
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), initialWeights=array([1.0]))
>>> lrm = LinearRegressionWithSGD.train(sc.parallelize(data), iterations=10,
... initialWeights=array([1.0]))
>>> abs(lrm.predict(np.array([0.0])) - 0) < 0.5
True
>>> abs(lrm.predict(SparseVector(1, {0: 1.0})) - 1) < 0.5
True
>>> lrm = RidgeRegressionWithSGD.train(sc.parallelize(data), iterations=100, step=1.0,
>>> lrm = RidgeRegressionWithSGD.train(sc.parallelize(data), iterations=10, step=1.0,
... regParam=0.01, miniBatchFraction=1.0, initialWeights=array([1.0]), intercept=True,
... validateData=True)
>>> abs(lrm.predict(np.array([0.0])) - 0) < 0.5
Expand Down Expand Up @@ -396,7 +401,7 @@ def _test():
from pyspark import SparkContext
import pyspark.mllib.regression
globs = pyspark.mllib.regression.__dict__.copy()
globs['sc'] = SparkContext('local[4]', 'PythonTest', batchSize=2)
globs['sc'] = SparkContext('local[2]', 'PythonTest', batchSize=2)
(failure_count, test_count) = doctest.testmod(globs=globs, optionflags=doctest.ELLIPSIS)
globs['sc'].stop()
if failure_count:
Expand Down
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