[SEDONA-667] Getis Ord (#1652) #3319
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| name: Python build | |
| on: | |
| push: | |
| branches: | |
| - master | |
| paths: | |
| - 'common/**' | |
| - 'spark/**' | |
| - 'spark-shaded/**' | |
| - 'pom.xml' | |
| - 'python/**' | |
| - '.github/workflows/python.yml' | |
| pull_request: | |
| branches: | |
| - '*' | |
| paths: | |
| - 'common/**' | |
| - 'spark/**' | |
| - 'spark-shaded/**' | |
| - 'pom.xml' | |
| - 'python/**' | |
| - '.github/workflows/python.yml' | |
| env: | |
| MAVEN_OPTS: -Dmaven.wagon.httpconnectionManager.ttlSeconds=60 | |
| JAI_CORE_VERSION: "1.1.3" | |
| JAI_CODEC_VERSION: "1.1.3" | |
| JAI_IMAGEIO_VERSION: "1.1" | |
| DO_NOT_TRACK: true | |
| permissions: | |
| contents: read | |
| jobs: | |
| build: | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| matrix: | |
| include: | |
| - spark: '3.5.0' | |
| scala: '2.12.8' | |
| python: '3.10' | |
| shapely: '1' | |
| - spark: '3.5.0' | |
| scala: '2.12.8' | |
| python: '3.10' | |
| - spark: '3.5.0' | |
| scala: '2.12.8' | |
| python: '3.9' | |
| - spark: '3.5.0' | |
| scala: '2.12.8' | |
| python: '3.8' | |
| - spark: '3.4.0' | |
| scala: '2.12.8' | |
| python: '3.10' | |
| - spark: '3.4.0' | |
| scala: '2.12.8' | |
| python: '3.9' | |
| - spark: '3.4.0' | |
| scala: '2.12.8' | |
| python: '3.8' | |
| - spark: '3.4.0' | |
| scala: '2.12.8' | |
| python: '3.7' | |
| - spark: '3.4.0' | |
| scala: '2.12.8' | |
| python: '3.7' | |
| shapely: '1' | |
| - spark: '3.3.0' | |
| scala: '2.12.8' | |
| python: '3.8' | |
| env: | |
| VENV_PATH: /home/runner/.local/share/virtualenvs/python-${{ matrix.python }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-java@v4 | |
| with: | |
| distribution: 'zulu' | |
| java-version: '8' | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Cache Maven packages | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.m2 | |
| key: ${{ runner.os }}-m2-${{ hashFiles('**/pom.xml') }} | |
| restore-keys: ${{ runner.os }}-m2 | |
| - env: | |
| SPARK_VERSION: ${{ matrix.spark }} | |
| SCALA_VERSION: ${{ matrix.scala }} | |
| run: | | |
| SPARK_COMPAT_VERSION=${SPARK_VERSION:0:3} | |
| mvn -q clean install -DskipTests -Dspark=${SPARK_COMPAT_VERSION} -Dscala=${SCALA_VERSION:0:4} -Dgeotools | |
| - run: sudo apt-get -y install python3-pip python-dev-is-python3 | |
| - run: sudo pip3 install -U setuptools | |
| - run: sudo pip3 install -U wheel | |
| - run: sudo pip3 install -U virtualenvwrapper | |
| - run: python3 -m pip install pipenv | |
| - run: cd python; python3 setup.py build_ext --inplace | |
| - env: | |
| SPARK_VERSION: ${{ matrix.spark }} | |
| PYTHON_VERSION: ${{ matrix.python }} | |
| SHAPELY_VERSION: ${{ matrix.shapely }} | |
| run: | | |
| cd python | |
| if [ "${SHAPELY_VERSION}" == "1" ]; then | |
| echo "Patching Pipfile to use Shapely 1.x" | |
| sed -i 's/^shapely.*$/shapely="<2.0.0"/g' Pipfile | |
| fi | |
| export PIPENV_CUSTOM_VENV_NAME=python-${PYTHON_VERSION} | |
| pipenv --python ${PYTHON_VERSION} | |
| pipenv install pyspark==${SPARK_VERSION} | |
| pipenv install --dev | |
| pipenv graph | |
| - env: | |
| PYTHON_VERSION: ${{ matrix.python }} | |
| run: | | |
| wget --retry-connrefused --waitretry=10 --read-timeout=20 --timeout=15 --tries=5 https://repo.osgeo.org/repository/release/javax/media/jai_core/${JAI_CORE_VERSION}/jai_core-${JAI_CORE_VERSION}.jar | |
| wget --retry-connrefused --waitretry=10 --read-timeout=20 --timeout=15 --tries=5 https://repo.osgeo.org/repository/release/javax/media/jai_codec/${JAI_CODEC_VERSION}/jai_codec-${JAI_CODEC_VERSION}.jar | |
| wget --retry-connrefused --waitretry=10 --read-timeout=20 --timeout=15 --tries=5 https://repo.osgeo.org/repository/release/javax/media/jai_imageio/${JAI_IMAGEIO_VERSION}/jai_imageio-${JAI_IMAGEIO_VERSION}.jar | |
| mv -v jai_core-${JAI_CORE_VERSION}.jar ${VENV_PATH}/lib/python${PYTHON_VERSION}/site-packages/pyspark/jars | |
| mv -v jai_codec-${JAI_CODEC_VERSION}.jar ${VENV_PATH}/lib/python${PYTHON_VERSION}/site-packages/pyspark/jars | |
| mv -v jai_imageio-${JAI_IMAGEIO_VERSION}.jar ${VENV_PATH}/lib/python${PYTHON_VERSION}/site-packages/pyspark/jars | |
| - env: | |
| PYTHON_VERSION: ${{ matrix.python }} | |
| run: find spark-shaded/target -name sedona-*.jar -exec cp {} ${VENV_PATH}/lib/python${PYTHON_VERSION}/site-packages/pyspark/jars/ \; | |
| - env: | |
| PYTHON_VERSION: ${{ matrix.python }} | |
| run: | | |
| export SPARK_HOME=${VENV_PATH}/lib/python${PYTHON_VERSION}/site-packages/pyspark | |
| cd python | |
| source ${VENV_PATH}/bin/activate | |
| pytest tests | |
| - env: | |
| PYTHON_VERSION: ${{ matrix.python }} | |
| run: | | |
| if [ ! -f "${VENV_PATH}/lib/python${PYTHON_VERSION}/site-packages/pyspark/sbin/start-connect-server.sh" ] | |
| then | |
| echo "Skipping connect tests for Spark $SPARK_VERSION" | |
| exit | |
| fi | |
| export SPARK_HOME=${VENV_PATH}/lib/python${PYTHON_VERSION}/site-packages/pyspark | |
| export SPARK_REMOTE=local | |
| cd python | |
| source ${VENV_PATH}/bin/activate | |
| pip install "pyspark[connect]==${SPARK_VERSION}" | |
| pytest tests/sql/test_dataframe_api.py |