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[Python] 17.0.0 wrongly installs multiple stray directories into site-packages #43299

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mgorny opened this issue Jul 17, 2024 · 4 comments
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@mgorny
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mgorny commented Jul 17, 2024

Describe the bug, including details regarding any error messages, version, and platform.

$ pip install pyarrow
Collecting pyarrow
  Downloading pyarrow-17.0.0-cp312-cp312-manylinux_2_28_x86_64.whl.metadata (3.3 kB)
Collecting numpy>=1.16.6 (from pyarrow)
  Using cached numpy-2.0.0-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (60 kB)
Downloading pyarrow-17.0.0-cp312-cp312-manylinux_2_28_x86_64.whl (39.9 MB)
   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 39.9/39.9 MB 11.0 MB/s eta 0:00:00
Using cached numpy-2.0.0-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (19.0 MB)
Installing collected packages: numpy, pyarrow
Successfully installed numpy-2.0.0 pyarrow-17.0.0
$ ls .venv/lib/python3.12/site-packages/
benchmarks     examples  numpy-2.0.0.dist-info  pip                   pyarrow                   scripts
cmake_modules  numpy     numpy.libs             pip-24.1.2.dist-info  pyarrow-17.0.0.dist-info

Note that it wrongly installed benchmarks, cmake_modules, examples and scripts as top-level Python packages.

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@raulcd
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raulcd commented Jul 18, 2024

Hi,

Thanks for reporting. It seems we added this bug when migrating from setup.py to pyproject.toml

@timkpaine
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duplicate of #43280

@pitrou pitrou added this to the 18.0.0 milestone Aug 8, 2024
@pitrou pitrou added the Priority: Blocker Marks a blocker for the release label Aug 8, 2024
raulcd added a commit to raulcd/arrow that referenced this issue Sep 3, 2024
jorisvandenbossche pushed a commit that referenced this issue Sep 5, 2024
…ng packages on setuptools (#43325)

### Rationale for this change

Currently we include everything when building wheels, see:
```
$ pip install pyarrow
Collecting pyarrow
  Downloading pyarrow-17.0.0-cp310-cp310-manylinux_2_28_x86_64.whl (39.9 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 39.9/39.9 MB 33.8 MB/s eta 0:00:00
Collecting numpy>=1.16.6
  Using cached numpy-2.0.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (19.3 MB)
Installing collected packages: numpy, pyarrow
Successfully installed numpy-2.0.0 pyarrow-17.0.0
(test-env)  $ ls test-env/lib/python3.10/site-packages/
benchmarks/                  distutils-precedence.pth     numpy-2.0.0.dist-info/       pip-22.0.2.dist-info/        pyarrow-17.0.0.dist-info/    setuptools-59.6.0.dist-info/ 
cmake_modules/               examples/                    numpy.libs/                  pkg_resources/               scripts/                     
_distutils_hack/             numpy/                       pip/                         pyarrow/                     setuptools/    
```

### What changes are included in this PR?

Use `include` as seen here: https://setuptools.pypa.io/en/latest/userguide/package_discovery.html#finding-simple-packages

### Are these changes tested?

Will check via the build wheel on CI

### Are there any user-facing changes?

No and yes :)
We will remove unnecessary files
* GitHub Issue: #43299

Lead-authored-by: Raúl Cumplido <raulcumplido@gmail.com>
Co-authored-by: Antoine Pitrou <antoine@python.org>
Signed-off-by: Joris Van den Bossche <jorisvandenbossche@gmail.com>
@jorisvandenbossche
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Issue resolved by pull request 43325
#43325

@mgorny
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mgorny commented Sep 5, 2024

Thanks!

zanmato1984 pushed a commit to zanmato1984/arrow that referenced this issue Sep 6, 2024
… finding packages on setuptools (apache#43325)

### Rationale for this change

Currently we include everything when building wheels, see:
```
$ pip install pyarrow
Collecting pyarrow
  Downloading pyarrow-17.0.0-cp310-cp310-manylinux_2_28_x86_64.whl (39.9 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 39.9/39.9 MB 33.8 MB/s eta 0:00:00
Collecting numpy>=1.16.6
  Using cached numpy-2.0.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (19.3 MB)
Installing collected packages: numpy, pyarrow
Successfully installed numpy-2.0.0 pyarrow-17.0.0
(test-env)  $ ls test-env/lib/python3.10/site-packages/
benchmarks/                  distutils-precedence.pth     numpy-2.0.0.dist-info/       pip-22.0.2.dist-info/        pyarrow-17.0.0.dist-info/    setuptools-59.6.0.dist-info/ 
cmake_modules/               examples/                    numpy.libs/                  pkg_resources/               scripts/                     
_distutils_hack/             numpy/                       pip/                         pyarrow/                     setuptools/    
```

### What changes are included in this PR?

Use `include` as seen here: https://setuptools.pypa.io/en/latest/userguide/package_discovery.html#finding-simple-packages

### Are these changes tested?

Will check via the build wheel on CI

### Are there any user-facing changes?

No and yes :)
We will remove unnecessary files
* GitHub Issue: apache#43299

Lead-authored-by: Raúl Cumplido <raulcumplido@gmail.com>
Co-authored-by: Antoine Pitrou <antoine@python.org>
Signed-off-by: Joris Van den Bossche <jorisvandenbossche@gmail.com>
khwilson pushed a commit to khwilson/arrow that referenced this issue Sep 14, 2024
… finding packages on setuptools (apache#43325)

### Rationale for this change

Currently we include everything when building wheels, see:
```
$ pip install pyarrow
Collecting pyarrow
  Downloading pyarrow-17.0.0-cp310-cp310-manylinux_2_28_x86_64.whl (39.9 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 39.9/39.9 MB 33.8 MB/s eta 0:00:00
Collecting numpy>=1.16.6
  Using cached numpy-2.0.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (19.3 MB)
Installing collected packages: numpy, pyarrow
Successfully installed numpy-2.0.0 pyarrow-17.0.0
(test-env)  $ ls test-env/lib/python3.10/site-packages/
benchmarks/                  distutils-precedence.pth     numpy-2.0.0.dist-info/       pip-22.0.2.dist-info/        pyarrow-17.0.0.dist-info/    setuptools-59.6.0.dist-info/ 
cmake_modules/               examples/                    numpy.libs/                  pkg_resources/               scripts/                     
_distutils_hack/             numpy/                       pip/                         pyarrow/                     setuptools/    
```

### What changes are included in this PR?

Use `include` as seen here: https://setuptools.pypa.io/en/latest/userguide/package_discovery.html#finding-simple-packages

### Are these changes tested?

Will check via the build wheel on CI

### Are there any user-facing changes?

No and yes :)
We will remove unnecessary files
* GitHub Issue: apache#43299

Lead-authored-by: Raúl Cumplido <raulcumplido@gmail.com>
Co-authored-by: Antoine Pitrou <antoine@python.org>
Signed-off-by: Joris Van den Bossche <jorisvandenbossche@gmail.com>
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