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Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease

R 87 33 Updated Jul 1, 2021

CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.

Jupyter Notebook 349 53 Updated Oct 20, 2024

一本 GPT4 生成的单词书📚,超过 8000 个单词分析,涵盖了词义、例句、词根词缀、变形、文化背景、记忆技巧和小故事

HTML 3,980 261 Updated Oct 14, 2024

Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics

Jupyter Notebook 2 Updated Aug 4, 2023

A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gene regulatory network (tpGRN) for single-cell transcriptomic …

R 44 5 Updated Aug 14, 2024

A list of positions (mostly biology-related) open to apply

32 8 Updated Nov 1, 2024

润学之各主流发达移民国家比较

268 13 Updated Mar 31, 2022

Spatial Transcriptomics Capture Location Deconvolution

R 170 25 Updated Mar 4, 2024

Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and CyTOF data

R 34 7 Updated Aug 23, 2023

SIB course on single cell transcriptomics by mostly using the Seurat pipeline

R 78 36 Updated Dec 16, 2024

Collection of bioinformatics training materials

Python 989 183 Updated Dec 22, 2024

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

R 325 54 Updated Dec 11, 2024

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

Jupyter Notebook 1,430 467 Updated Dec 11, 2022

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

3,257 994 Updated Dec 4, 2024

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

Jupyter Notebook 526 65 Updated Dec 20, 2024

基于 OpenAI API 的文本翻译、文本润色、语法纠错 Bob 插件,让我们一起迎接不需要巴别塔的新时代!Licensed under CC BY-NC-SA 4.0

TypeScript 5,569 256 Updated Dec 28, 2024

Use ChatGPT to summarize the arXiv papers. 全流程加速科研,利用chatgpt进行论文全文总结+专业翻译+润色+审稿+审稿回复

Python 18,638 1,946 Updated Apr 4, 2024

This repo includes ChatGPT prompt curation to use ChatGPT better.

HTML 115,469 15,722 Updated Nov 11, 2024

《R语言数据可视化之美》配套代码

PostScript 1 Updated Jun 3, 2019

R package for the analysis of single-cell immune repertoires

R 1 Updated Jun 29, 2022

This repository was used to store the code, which was used in "Single-cell Profiling Reveals Distinct Adaptive Immune Hallmarks in MDA5+ Dermatomyositis with Therapeutic Implications"

R 7 2 Updated Mar 30, 2022

Package for analyzing VDJ (T-/B-cell receptor) clones in single-cell data

R 3 Updated Oct 18, 2023

对单细胞测序的学习,跟着流程走‘CNS图表复现’走

R 25 2 Updated Apr 2, 2021