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Analysis Makefile Dependencies

Status: Open.

#47 In adamjorr/somatic-variation;

· andreag186 opened on Jan 26, 2023

[mpileup] no input file/data given in Estimating False Negative Rate

Status: Open.

#46 In adamjorr/somatic-variation;

· AlejandroMS17 opened on Jul 28, 2019

Update the readme

Status: Open.

#43 In adamjorr/somatic-variation;

· adamjorr opened on Jan 24, 2018

Make chromosome plots

Status: Open.

#41 In adamjorr/somatic-variation;

· adamjorr opened on Jun 27, 2017

Give option to update a BED file of repeats every iteration

Status: Open.

#40 In adamjorr/somatic-variation;

· adamjorr opened on Jun 27, 2017

Discordance among replicates

Status: Open.

#29 In adamjorr/somatic-variation;

· roblanf opened on Mar 8, 2017

basic descriptions of what's being done and why

Status: Open.

#23 In adamjorr/somatic-variation;

· roblanf opened on Feb 20, 2017

make vcf_tab_to_fasta_alignment.pl properly handle temporary files

Status: Open.

#11 In adamjorr/somatic-variation;

· adamjorr opened on Dec 21, 2016

find elegant way to specify RGPU, RGLB, RGSM

Status: Open.

#6 In adamjorr/somatic-variation;

· adamjorr opened on Oct 7, 2016

work on script input validation

Status: Open.

#5 In adamjorr/somatic-variation;

· adamjorr opened on Oct 7, 2016