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Merged
jasenfinch merged 3 commits into from
Jan 11, 2024
Merged

v1.0.2 #48

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fb8dfc8
circumvent passing the list of graphs directly to tidygraph::bind_gra…
jasenfinch Dec 20, 2023
f078e08
bump version to 1.0.2
jasenfinch Dec 20, 2023
f970c3a
update package NEWS
jasenfinch Dec 20, 2023
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
Package: assignments
Title: Molecular Formula Assignment For High Resolution ESI-MS Based Metabolomics Data
Version: 1.0.1
Version: 1.0.2
Authors@R: person("Jasen", "Finch", email = "jsf9@aber.ac.uk", role = c("aut", "cre"))
Description: A molecular formula assignment approach for electrospray ionisation high resolution mass spectrometry based metabolomics data.
Depends: R (>= 3.5.0),
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4 changes: 4 additions & 0 deletions NEWS.md
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@@ -1,3 +1,7 @@
# assignments 1.0.2

* add a fix for an error caused by a breaking change in [`tidygraph`](https://tidygraph.data-imaginist.com/index.html) v1.3.0.

# assignments 1.0.1

* The default ppm threshold has been reduced to 4.
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11 changes: 9 additions & 2 deletions R/components.R
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Expand Up @@ -45,8 +45,15 @@ clean <- function(graph,adduct_rules_table){
}

if (length(cleaned_graph) > 0){
cleaned_graph <- cleaned_graph %>%
bind_graphs()
bound_graphs <- tbl_graph()
for (graph in cleaned_graph) {
bound_graphs <- bind_graphs(
bound_graphs,
graph
)
}

cleaned_graph <- bound_graphs
}

return(cleaned_graph)
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