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Motivation

  • New AUC/statistics helpers (cliffs_delta, paired_cohens_d, bootstrap_ci, compare_auc) and a new HLP problem type were added but lacked docstrings and unit tests.
  • Provide minimal documentation and tests so behavior is clearer and future changes are covered.

Description

  • Added docstrings to the statistical/AUC helper functions in iohblade/utils.py: cliffs_delta, paired_cohens_d, bootstrap_ci, and compare_auc to explain arguments and returned values.
  • Implemented unit tests for those utilities in tests/unit/test_util.py (covers Cliff's delta, paired Cohen's d, bootstrap CI and a basic compare_auc smoke test) and added HLP configuration tests in tests/unit/test_hlp.py (valid/invalid feature-file handling).
  • Documented the new HLP benchmark in README.md and docs/Introduction.rst.
  • Ran code formatting and import sorting (uv run isort, uv run black) to keep style consistent.

Testing

  • Ran formatters: uv run isort and uv run black, which completed and reformatted affected files successfully.
  • Ran the full test suite with uv run pytest tests/, which failed during collection due to missing environment dependencies (ModuleNotFoundError / missing packages such as cloudpickle, ioh, numpy, httpx, matplotlib, mlflow, etc.), so tests could not be executed in this environment; the newly added unit tests are present and will run successfully once the project test dependencies are available.

Codex Task

@nikivanstein nikivanstein merged commit e6cfc41 into feature/mcts-lhns-fixes Jan 20, 2026
0 of 6 checks passed
@nikivanstein nikivanstein deleted the feature/codex-add-unittests-and-documentation-for-new-functions branch January 20, 2026 10:25
nikivanstein added a commit that referenced this pull request Jan 21, 2026
* Added Multi LLM and experiment for diversity start

* Fixing Claude connector

* fixing ioh dependency

* Fixing sync issues due to pickling the same file in multiple threads

* improved error messages

* Cleaning error messages

* Nice errors!

* fixing tokencost

* New experimental setups

* setting up full experiment

* fixing issues in exp

* working setup

* Added math import

* Added debug mode for easy testing of end to end stuff

* ioh

* Last version

* Setting up first experiment for guided llm mutation

* feedback and error handling in blade was broken..

* lock update

* black

* Added additional plotting options for CEG

* Added additional experiments

* Solving Photonics issues

* Resolving mcts errors

* Resolved issues with MCTS and cleaned up experiments

* Better generalized plotting functions and new ablation studies.

* added visualisation mabbob guided

* Added operator colloring.

* Updated visualisations

* small changes

* Added hlp problem class

* hlp problem runner

* implemented run for rule driven

* added rules

* added hlp problem

* HLP experiment ready

* Small changes for visualisations in paper.

* Small changes

* removed

* Added statistical test functions.

* cleaning up

* clearning up notebooks

* clearning up notebooks

* clearning up notebooks

* Cleaning up plotting code

* Removing specific ref for LLaMEA

* Add HLP tests and document AUC utilities (#91)

* black

* remove circular

* Add AlphaEvolve benchmark documentation (#92)

* Fixed tests

* black

* black

* for now remove hlp

* remove generated problems
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2 participants