https://github.com/bioio-devs/bioio">https://github.com/bioio-devs/bioio) | `3.0.0` | `3.2.0` | | [bioio-ome-zarr](https://github.com/bioio-devs/bioio-ome-zarr) | `3.0.3` | `3.2.1` | | [fire](https://github.com/google/python-fire) | `0.7.0` | `0.7.1` | | [matplotlib](https://github.com/matplotlib/matplotlib) | `3.10.7` | `3.10.8` | | [numpy](https://github.com/numpy/numpy) | `2.2.6` | `2.4.2` | | [pandas](https://github.com/pandas-dev/pandas) | `2.2.3` | `3.0.0` | | [pillow](https://github.com/python-pillow/Pillow) | `12.0.0` | `12.1.0` | | [pyarrow](https://github.com/apache/arrow) | `22.0.0` | `23.0.0` | | [pyvista](https://github.com/pyvista/pyvista) | `0.46.4` | `0.46.5` | | [trame-vtk](https://github.com/Kitware/trame-vtk) | `2.10.0` | `2.10.3` | | [trame-vuetify](https://github.com/Kitware/trame-vuetify) | `3.1.0` | `3.2.1` | | [vortex-data](https://github.com/spiraldb/vortex) | `0.57.2` | `0.58.0` | | [poethepoet](https://github.com/nat-n/poethepoet) | `0.34.0` | `0.40.0` | | [pytest](https://github.com/pytest-dev/pytest) | `8.3.5` | `9.0.2` | | [myst-nb](https://github.com/executablebooks/myst-nb) | `1.2.0` | `1.3.0` | | [sphinx](https://github.com/sphinx-doc/sphinx) | `8.2.3` | `9.0.4` | | [black](https://github.com/psf/black) | `25.1.0` | `26.1.0` | | [ipykernel](https://github.com/ipython/ipykernel) | `6.29.5` | `7.1.0` | | [jupyterlab](https://github.com/jupyterlab/jupyterlab) | `4.4.2` | `4.5.3` | | [jupytext](https://github.com/mwouts/jupytext) | `1.17.1` | `1.19.1` | Updates `bioio` from 3.0.0 to 3.2.0 - [Release notes](https://github.com/bioio-devs/bioio/releases) - [Commits](bioio-devs/bioio@v3.0.0...v3.2.0) Updates `bioio-ome-zarr` from 3.0.3 to 3.2.1 - [Release notes](https://github.com/bioio-devs/bioio-ome-zarr/releases) - [Commits](bioio-devs/bioio-ome-zarr@v3.0.3...v3.2.1) Updates `fire` from 0.7.0 to 0.7.1 - [Release notes](https://github.com/google/python-fire/releases) - [Commits](google/python-fire@v0.7.0...v0.7.1) Updates `matplotlib` from 3.10.7 to 3.10.8 - [Release notes](https://github.com/matplotlib/matplotlib/releases) - [Commits](matplotlib/matplotlib@v3.10.7...v3.10.8) Updates `numpy` from 2.2.6 to 2.4.2 - [Release notes](https://github.com/numpy/numpy/releases) - [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst) - [Commits](numpy/numpy@v2.2.6...v2.4.2) Updates `pandas` from 2.2.3 to 3.0.0 - [Release notes](https://github.com/pandas-dev/pandas/releases) - [Commits](pandas-dev/pandas@v2.2.3...v3.0.0) Updates `pillow` from 12.0.0 to 12.1.0 - [Release notes](https://github.com/python-pillow/Pillow/releases) - [Changelog](https://github.com/python-pillow/Pillow/blob/main/CHANGES.rst) - [Commits](python-pillow/Pillow@12.0.0...12.1.0) Updates `pyarrow` from 22.0.0 to 23.0.0 - [Release notes](https://github.com/apache/arrow/releases) - [Commits](apache/arrow@apache-arrow-22.0.0...apache-arrow-23.0.0) Updates `pyvista` from 0.46.4 to 0.46.5 - [Release notes](https://github.com/pyvista/pyvista/releases) - [Commits](pyvista/pyvista@v0.46.4...v0.46.5) Updates `trame-vtk` from 2.10.0 to 2.10.3 - [Release notes](https://github.com/Kitware/trame-vtk/releases) - [Changelog](https://github.com/Kitware/trame-vtk/blob/master/CHANGELOG.md) - [Commits](Kitware/trame-vtk@v2.10.0...v2.10.3) Updates `trame-vuetify` from 3.1.0 to 3.2.1 - [Release notes](https://github.com/Kitware/trame-vuetify/releases) - [Changelog](https://github.com/Kitware/trame-vuetify/blob/master/CHANGELOG.md) - [Commits](Kitware/trame-vuetify@v3.1.0...v3.2.1) Updates `vortex-data` from 0.57.2 to 0.58.0 - [Release notes](https://github.com/spiraldb/vortex/releases) - [Commits](vortex-data/vortex@0.57.2...0.58.0) Updates `poethepoet` from 0.34.0 to 0.40.0 - [Release notes](https://github.com/nat-n/poethepoet/releases) - [Commits](nat-n/poethepoet@v0.34.0...v0.40.0) Updates `pytest` from 8.3.5 to 9.0.2 - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](pytest-dev/pytest@8.3.5...9.0.2) Updates `myst-nb` from 1.2.0 to 1.3.0 - [Release notes](https://github.com/executablebooks/myst-nb/releases) - [Changelog](https://github.com/executablebooks/MyST-NB/blob/main/CHANGELOG.md) - [Commits](executablebooks/MyST-NB@v1.2.0...v1.3.0) Updates `sphinx` from 8.2.3 to 9.0.4 - [Release notes](https://github.com/sphinx-doc/sphinx/releases) - [Changelog](https://github.com/sphinx-doc/sphinx/blob/v9.0.4/CHANGES.rst) - [Commits](sphinx-doc/sphinx@v8.2.3...v9.0.4) Updates `black` from 25.1.0 to 26.1.0 - [Release notes](https://github.com/psf/black/releases) - [Changelog](https://github.com/psf/black/blob/main/CHANGES.md) - [Commits](psf/black@25.1.0...26.1.0) Updates `ipykernel` from 6.29.5 to 7.1.0 - [Release notes](https://github.com/ipython/ipykernel/releases) - [Changelog](https://github.com/ipython/ipykernel/blob/main/CHANGELOG.md) - [Commits](ipython/ipykernel@v6.29.5...v7.1.0) Updates `jupyterlab` from 4.4.2 to 4.5.3 - [Release notes](https://github.com/jupyterlab/jupyterlab/releases) - [Changelog](https://github.com/jupyterlab/jupyterlab/blob/main/RELEASE.md) - [Commits](https://github.com/jupyterlab/jupyterlab/compare/@jupyterlab/lsp@4.4.2...@jupyterlab/lsp@4.5.3) Updates `jupytext` from 1.17.1 to 1.19.1 - [Release notes](https://github.com/mwouts/jupytext/releases) - [Changelog](https://github.com/mwouts/jupytext/blob/main/CHANGELOG.md) - [Commits](mwouts/jupytext@v1.17.1...v1.19.1) --- updated-dependencies: - dependency-name: bioio dependency-version: 3.2.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: uv - dependency-name: bioio-ome-zarr dependency-version: 3.2.1 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: uv - dependency-name: fire dependency-version: 0.7.1 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: matplotlib dependency-version: 3.10.8 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: numpy dependency-version: 2.4.2 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: uv - dependency-name: pandas dependency-version: 3.0.0 dependency-type: direct:production update-type: version-update:semver-major dependency-group: uv - dependency-name: pillow dependency-version: 12.1.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: uv - dependency-name: pyarrow dependency-version: 23.0.0 dependency-type: direct:production update-type: version-update:semver-major dependency-group: uv - dependency-name: pyvista dependency-version: 0.46.5 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: trame-vtk dependency-version: 2.10.3 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: trame-vuetify dependency-version: 3.2.1 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: uv - dependency-name: vortex-data dependency-version: 0.58.0 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: poethepoet dependency-version: 0.40.0 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: pytest dependency-version: 9.0.2 dependency-type: direct:development update-type: version-update:semver-major dependency-group: uv - dependency-name: myst-nb dependency-version: 1.3.0 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: sphinx dependency-version: 9.0.4 dependency-type: direct:development update-type: version-update:semver-major dependency-group: uv - dependency-name: black dependency-version: 26.1.0 dependency-type: direct:development update-type: version-update:semver-major dependency-group: uv - dependency-name: ipykernel dependency-version: 7.1.0 dependency-type: direct:development update-type: version-update:semver-major dependency-group: uv - dependency-name: jupyterlab dependency-version: 4.5.3 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: jupytext dependency-version: 1.19.1 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv ... Signed-off-by: dependabot[bot] <support@github.com>

Commits

Commits on Feb 3, 2026

Bump the uv group with 20 updates