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4 changes: 2 additions & 2 deletions docs/academic/related_projects.md
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Expand Up @@ -48,10 +48,10 @@ You may also want to take a look at the (incomplete) list of ["unofficial" packa
* [StarSystem](https://github.com/elettrotecnica/starsystem) command-line tool implementing best practices in supervised classification, including "agnostic" feature selection.
* [TClass](https://github.com/fracpete/tclass-weka-package) - classifying multivariate time series.
* [Tertius](http://www.cs.bris.ac.uk/research/machinelearning/tertius/) - a system for rule discovery.
* [TUBE](https://www.cs.waikato.ac.nz/ml/weka/TUBE/) - Tree-based Density Estimation Algorithms.
* [TUBE](https://ml.cms.waikato.ac.nz/weka/TUBE/) - Tree-based Density Estimation Algorithms.
* [TunedIT](http://tunedit.org/) - Automated tests of machine-learning algorithms. Repository of datasets, algorithms and benchmarks.
* [Weka for Computational Genetics](http://sourceforge.net/projects/wekacg) - Multifactor Dimensionality Reduction (MDR) added to the Weka package.
* [Weka Proper](https://www.cs.waikato.ac.nz/ml/proper/)- Database propositionalization for Weka.
* [Weka Proper](https://ml.cms.waikato.ac.nz/proper/)- Database propositionalization for Weka.
* [weka4WS](http://gridlab.dimes.unical.it/weka4ws/) - distributed data mining.
* [Weka-GDPM and Weka-STPM](http://www.inf.ufsc.br/~vania/software.html) - Weka for geographic data processing and Moving Object Data Analysis and Mining.
* [WekaMetal](http://www.cs.bris.ac.uk/research/machinelearning/wekametal/) - a meta-learning extension to Weka.
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2 changes: 1 addition & 1 deletion docs/citing_weka.md
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The best reference for WEKA 3.8 and 3.9 is the [online
appendix on the WEKA
workbench](https://www.cs.waikato.ac.nz/ml/weka/Witten_et_al_2016_appendix.pdf)
workbench](https://ml.cms.waikato.ac.nz/weka/Witten_et_al_2016_appendix.pdf)
for the fourth edition of "Data Mining: Practical Machine Learning
Tools and Techniques" by I.H. Witten, Eibe Frank, Mark A. Hall, and
Chris J. Pal. The citation is
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2 changes: 1 addition & 1 deletion docs/datasets.md
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Expand Up @@ -4,7 +4,7 @@ Some example datasets for analysis with Weka are included in the Weka distributi

* A jarfile containing 37 classification problems originally obtained from the [UCI repository of machine learning datasets](https://www.ics.uci.edu/~mlearn/mlrepository.html) ([datasets-UCI.jar](https://prdownloads.sourceforge.net/weka/datasets-UCI.jar), 1,190,961 Bytes).
* A jarfile containing 37 regression problems obtained from various sources ([datasets-numeric.jar](https://prdownloads.sourceforge.net/weka/datasets-numeric.jar), 169,344 Bytes).
* A jarfile containing 6 agricultural datasets obtained from agricultural researchers in New Zealand ([agridatasets.jar](https://www.cs.waikato.ac.nz/~ml/weka/agridatasets.jar), 31,200 Bytes).
* A jarfile containing 6 agricultural datasets obtained from agricultural researchers in New Zealand ([agridatasets.jar](https://ml.cms.waikato.ac.nz/weka/agridatasets.jar), 31,200 Bytes).
* A jarfile containing 30 regression datasets collected by [Professor Luis Torgo](https://web.cs.dal.ca/~ltorgo/) ([regression-datasets.jar](https://prdownloads.sourceforge.net/weka/regression-datasets.jar), 10,090,266 Bytes).
* A gzip'ed tar containing [UCI ML](https://www.ics.uci.edu/~mlearn/MLRepository.html) and [UCI KDD](https://kdd.ics.uci.edu/) datasets ([uci-20070111.tar.gz](https://prdownloads.sourceforge.net/weka/uci-20070111.tar.gz), 17,952,832 Bytes)
* A gzip'ed tar containing [StatLib](http://lib.stat.cmu.edu/datasets/) datasets ([statlib-20050214.tar.gz](https://prdownloads.sourceforge.net/weka/statlib-20050214.tar.gz), 12,785,582 Bytes)
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10 changes: 5 additions & 5 deletions docs/documentation.md
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Expand Up @@ -3,25 +3,25 @@ software. Weka comes with built-in help and includes a comprehensive
manual. For an introduction to the machine learning techniques
implemented in Weka, and the software itself, consider taking a look
at the book [Data Mining: Practical Machine Learning Tools and
Techniques](https://www.cs.waikato.ac.nz/~ml/weka/book.html) and its
Techniques](https://ml.cms.waikato.ac.nz/weka/book.html) and its
freely available [online appendix on the Weka
workbench](https://www.cs.waikato.ac.nz/ml/weka/Witten_et_al_2016_appendix.pdf),
workbench](https://ml.cms.waikato.ac.nz/weka/Witten_et_al_2016_appendix.pdf),
providing an overview of the software. Closely linked to the book,
there are also free [online
courses](https://www.cs.waikato.ac.nz/~ml/weka/courses.html) on data
courses](https://ml.cms.waikato.ac.nz/weka/courses.html) on data
mining with the machine learning techniques in Weka. A list of sources
with information on Weka is provided below.

# General documentation

* The online appendix [The Weka Workbench](https://www.cs.waikato.ac.nz/ml/weka/Witten_et_al_2016_appendix.pdf), distributed as a free PDF, for the fourth edition of the book [Data Mining: Practical Machine Learning Tools and Techniques](https://www.cs.waikato.ac.nz/~ml/weka/book.html).
* The online appendix [The Weka Workbench](https://ml.cms.waikato.ac.nz/weka/Witten_et_al_2016_appendix.pdf), distributed as a free PDF, for the fourth edition of the book [Data Mining: Practical Machine Learning Tools and Techniques](https://ml.cms.waikato.ac.nz/weka/book.html).

* The [manual for Weka 3.8](https://prdownloads.sourceforge.net/weka/WekaManual-3-8-3.pdf?download) and the [manual for Weka 3.9](https://prdownloads.sourceforge.net/weka/WekaManual-3-9-3.pdf?download), as included in the distribution of the software when you download it.

* The [Javadoc for Weka 3.8](https://weka.sourceforge.io/doc.stable-3-8/) and the [Javadoc for Weka 3.9](https://weka.sourceforge.io/doc.dev/), extracted directly from the source code, providing information on the API and parameters for command-line usage of Weka.

* The videos and slides for the online courses on [Data Mining with Weka](https://www.cs.waikato.ac.nz/ml/weka/mooc/dataminingwithweka/), [More Data Mining with Weka](https://www.cs.waikato.ac.nz/ml/weka/mooc/moredataminingwithweka/), and [Advanced Data Mining with Weka](https://www.cs.waikato.ac.nz/ml/weka/mooc/advanceddataminingwithweka/).
* The videos and slides for the online courses on [Data Mining with Weka](https://ml.cms.waikato.ac.nz/weka/mooc/dataminingwithweka/), [More Data Mining with Weka](https://ml.cms.waikato.ac.nz/weka/mooc/moredataminingwithweka/), and [Advanced Data Mining with Weka](https://ml.cms.waikato.ac.nz/weka/mooc/advanceddataminingwithweka/).

# Weka packages

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4 changes: 2 additions & 2 deletions docs/downloading_weka.md
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Expand Up @@ -21,7 +21,7 @@ source code is taken, compiled, and put together in ZIP files. This
happens for both the development branch of the software and the stable
branch. Those who want the latest bug fixes before the next official
release is made can download these
[snapshots](https://www.cs.waikato.ac.nz/~ml/weka/snapshots/weka_snapshots.html).
[snapshots](https://ml.cms.waikato.ac.nz/weka/snapshots/weka_snapshots.html).

# Stable version

Expand Down Expand Up @@ -162,7 +162,7 @@ Weka 3.8 package manager does not start up, please delete the file
`installedPackageCache.ser` in the `packages` folder that resides in
the `wekafiles` folder in your user home. Also, serialized Weka models
created in 3.7 are incompatible with 3.8. The [model
migrator](https://www.cs.waikato.ac.nz/~ml/weka/modelMigrator.jar)
migrator](https://ml.cms.waikato.ac.nz/weka/modelMigrator.jar)
tool can migrate some models to 3.8 (a known
exception is RandomForest). Usage is as follows:

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2 changes: 1 addition & 1 deletion docs/getting_help.md
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Expand Up @@ -12,7 +12,7 @@ you can see the entire error output from Java (including the Java
stack trace). This makes it much more likely that you will get useful
help. When posting questions, comments, or bug reports to the Weka
mailing list, consider the [mailing list
etiquette](https://www.cs.waikato.ac.nz/~ml/weka/mailinglist_etiquette.html).
etiquette](https://ml.cms.waikato.ac.nz/weka/mailinglist_etiquette.html).

# Mailing list archive and mirrors

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6 changes: 3 additions & 3 deletions docs/learning_resources.md
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Expand Up @@ -10,6 +10,6 @@

# MOOCs

* [Data Mining with Weka](https://www.cs.waikato.ac.nz/ml/weka/mooc/dataminingwithweka/)
* [More Data Mining with Weka](https://www.cs.waikato.ac.nz/ml/weka/mooc/moredataminingwithweka/)
* [Advanced Data Mining with Weka](https://www.cs.waikato.ac.nz/ml/weka/mooc/advanceddataminingwithweka/)
* [Data Mining with Weka](https://ml.cms.waikato.ac.nz/weka/mooc/dataminingwithweka/)
* [More Data Mining with Weka](https://ml.cms.waikato.ac.nz/weka/mooc/moredataminingwithweka/)
* [Advanced Data Mining with Weka](https://ml.cms.waikato.ac.nz/weka/mooc/advanceddataminingwithweka/)
2 changes: 1 addition & 1 deletion docs/literature.md
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Expand Up @@ -22,4 +22,4 @@ Apart from [Data Mining: Practical Machine Learning Tools and Techniques](https:

* Hongbo Du (2010) [Data Mining Techniques and Applications](https://cengage.co.nz/product/title/data-mining-techniques-and-applications/isbn/9781844808915), Cengage Learning.

* A book explaining why [Weka won't learn](https://www.cs.waikato.ac.nz/~ml/images/weka_wont_learn.gif) (discovered by Stuart Inglis).
* A book explaining why [Weka won't learn](https://ml.cms.waikato.ac.nz/images/weka_wont_learn.gif) (discovered by Stuart Inglis).
2 changes: 1 addition & 1 deletion docs/mailing_list.md
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Expand Up @@ -4,4 +4,4 @@ The WEKA Mailing list can be found here:
* [Archives](https://list.waikato.ac.nz/hyperkitty/list/wekalist@list.waikato.ac.nz/) ([Mirror 1](https://weka.8497.n7.nabble.com/), [Mirror 2](https://marc.info/?l=wekalist)) for searching previous posted messages.


Before posting, please read the [mailing list etiquette](https://www.cs.waikato.ac.nz/~ml/weka/mailinglist_etiquette.html).
Before posting, please read the [mailing list etiquette](https://ml.cms.waikato.ac.nz/weka/mailinglist_etiquette.html).
4 changes: 2 additions & 2 deletions docs/message_classifier.md
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Expand Up @@ -6,9 +6,9 @@ In the following you'll find some information about the MessageClassifier from t
Depending on the version of the book, download the corresponding version (this article is based on the **2nd** edition):

* 1st Edition:
[MessageClassifier](https://www.cs.waikato.ac.nz/~ml/weka/example_code/MessageClassifier.java)
[MessageClassifier](https://ml.cms.waikato.ac.nz/weka/example_code/MessageClassifier.java)
* 2nd Edition:
[MessageClassifier](https://www.cs.waikato.ac.nz/~ml/weka/example_code/2ed/MessageClassifier.java) ([book](https://git.cms.waikato.ac.nz/weka/weka/-/tree/book2ndEd-branch/wekaexamples/src/main/java/wekaexamples/book/MessageClassifier.java), [stable-3.8](https://git.cms.waikato.ac.nz/weka/weka/-/tree/stable-3-8/wekaexamples/src/main/java/wekaexamples/book/MessageClassifier.java), [developer](https://git.cms.waikato.ac.nz/weka/weka/-/tree/main/trunk/wekaexamples/src/main/java/wekaexamples/book/MessageClassifier.java))
[MessageClassifier](https://ml.cms.waikato.ac.nz/weka/example_code/2ed/MessageClassifier.java) ([book](https://git.cms.waikato.ac.nz/weka/weka/-/tree/book2ndEd-branch/wekaexamples/src/main/java/wekaexamples/book/MessageClassifier.java), [stable-3.8](https://git.cms.waikato.ac.nz/weka/weka/-/tree/stable-3-8/wekaexamples/src/main/java/wekaexamples/book/MessageClassifier.java), [developer](https://git.cms.waikato.ac.nz/weka/weka/-/tree/main/trunk/wekaexamples/src/main/java/wekaexamples/book/MessageClassifier.java))

# Compiling
* compile the source code like this, if the `weka.jar` is already in your [CLASSPATH](classpath.md) environment variable:
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