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1. GUIdedRNA GUIdedRNA Public

   Docker based GUI for in-depth but accessible scRNA annotation and analysis

   R

2. Higgins_Lab Higgins_Lab Public

   Contains various scRNA/scATAC/RNA/Microarray analyses pipelines commonly used within the Higgins group.

   R 2

3. sc_sCD83_Mallia26 sc_sCD83_Mallia26 Public

   Code necessary to recreate sCD83 publication, Mallia 2026

   HTML

4. hyms_chronic_wounds hyms_chronic_wounds Public

   R

5. Ubels26_TCDifferentiation Ubels26_TCDifferentiation Public

   Contains models and output for quantitative T cell differentiation publication

   Python

6. aLSI_scRNA_annotation aLSI_scRNA_annotation Public

   aLSI approach to scRNA annotation for heteroskedastic data

   R