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Pull requests: Ultimagen/ugbio-utils

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Pull requests list

Expose RTG_MEM
#266 opened Feb 2, 2026 by gilhornung Loading…
1
BIOIN-2641: Add CIPOS confidence interval support to CNV VCFs
#265 opened Feb 2, 2026 by ilyasoifer Loading…
6
Refactor somatic featuremap classifier
#263 opened Jan 29, 2026 by inbalzelig-ugi Loading…
7
Allow input of multiple tasks as file
#251 opened Jan 14, 2026 by gilhornung Loading…
19
bioin-1751 fast pileup
#249 opened Jan 13, 2026 by ilyasoifer • Draft
@benzvigil
21
BIOIN-2549 filter in featuremap_to_dataframe
#231 opened Dec 31, 2025 by GatKrieger Loading…
55
BIOIN-2572 Fix saving srsnv_metadata.json with null values
#230 opened Dec 31, 2025 by orihir Loading…
8
BIOIN-2330 improve hmer indel filtering in GATK
#225 opened Dec 23, 2025 by ilyasoifer • Draft
BIOIN-2486 taps conversion in ugbio
#210 opened Dec 2, 2025 by GatKrieger Loading…
6
Improve null value assertion in test_selected_dtypes
#199 opened Nov 20, 2025 by avigailmo Loading…
1
BIOIN-1817 add quality smoothing
#168 opened Sep 27, 2025 by orihir Loading…
13
Cleaning up flow based read code, got rid of motif and error model
#167 opened Sep 26, 2025 by ilyasoifer Loading…
3
BIOIN-2072 Multiple minor fixes for indel aware featuremap calculations
#149 opened Aug 2, 2025 by ilyasoifer • Draft
Update vcflite to upstream 0.2.2 with enhanced query capabilities
#140 opened Jun 24, 2025 by GatKrieger Loading…
BIOIN-2212 parallelize generate synthetic signatures
#128 opened May 19, 2025 by GatKrieger Loading…
1
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