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Add some interface functions to support the new Gibbs sampler in Turing #144

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Add some interface functions to support the new Gibbs sampler in Turing #144

wants to merge 56 commits into from

Commits on Jul 12, 2024

  1. very incomplete draft

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    sunxd3 committed Jul 12, 2024
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  2. update getparams

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    sunxd3 committed Jul 12, 2024
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Commits on Jul 18, 2024

  1. Upstream condition and decondition from AbstractPPL

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    sunxd3 committed Jul 18, 2024
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Commits on Jul 22, 2024

  1. remove condition and decondition

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    sunxd3 committed Jul 22, 2024
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  2. add Compat to make new interface functions public

    @sunxd3
    sunxd3 committed Jul 22, 2024
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  3. bump minor version

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    sunxd3 committed Jul 22, 2024
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  4. bump minor version instead

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    sunxd3 committed Jul 22, 2024
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Commits on Aug 6, 2024

  1. unfinished gibbs example

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    sunxd3 committed Aug 6, 2024
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Commits on Aug 14, 2024

  1. some updates

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    sunxd3 committed Aug 14, 2024
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Commits on Aug 15, 2024

  1. more progress; still need to deal with w being on simplex

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    sunxd3 committed Aug 15, 2024
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  2. bit of format

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    sunxd3 committed Aug 15, 2024
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  3. results is wrong

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    sunxd3 committed Aug 15, 2024
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  4. Apply suggestions from code review 

    Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
    @sunxd3 @github-actions
    sunxd3 and github-actions[bot] authored Aug 15, 2024
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Commits on Aug 22, 2024

  1. add hierarchical normal problem

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    sunxd3 committed Aug 22, 2024
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Commits on Aug 23, 2024

  1. some updates; add doc

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    sunxd3 committed Aug 23, 2024
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  2. move folder into test

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    sunxd3 committed Aug 23, 2024
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  3. setup as a test

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    sunxd3 committed Aug 23, 2024
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  4. add to doc

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    sunxd3 committed Aug 23, 2024
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  5. format

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    sunxd3 committed Aug 23, 2024
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  6. bump patch version

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    sunxd3 committed Aug 23, 2024
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  7. reverse version bump -- already done

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    sunxd3 committed Aug 23, 2024
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  8. remove dep on Compat

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    sunxd3 committed Aug 23, 2024
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  9. updates to doc

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    sunxd3 committed Aug 23, 2024
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Commits on Sep 8, 2024

  1. update gibbs to add to the src folder

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    sunxd3 committed Sep 8, 2024
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  2. update mh code

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    sunxd3 committed Sep 8, 2024
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  3. update code further

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    sunxd3 committed Sep 8, 2024
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Commits on Sep 9, 2024

  1. fix test errors

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    sunxd3 committed Sep 9, 2024
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  2. format

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    sunxd3 committed Sep 9, 2024
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  3. fix doctest error

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    sunxd3 committed Sep 9, 2024
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  4. tidy up

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    sunxd3 committed Sep 9, 2024
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Commits on Sep 17, 2024

  1. updates

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    sunxd3 committed Sep 17, 2024
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  2. Update test/gibbs_example/mh.jl 

    Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
    @sunxd3 @github-actions
    sunxd3 and github-actions[bot] authored Sep 17, 2024
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  3. fix error

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    sunxd3 committed Sep 17, 2024
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  4. typo fix

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    sunxd3 committed Sep 17, 2024
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Commits on Sep 18, 2024

  1. Update src/gibbs.jl 

    Co-authored-by: Tor Erlend Fjelde <tor.erlend95@gmail.com>
    @sunxd3 @torfjelde
    sunxd3 and torfjelde authored Sep 18, 2024
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Commits on Sep 20, 2024

  1. rename gibbs test file to prepare for moving

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    sunxd3 committed Sep 20, 2024
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  2. move gibbs.jl

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    sunxd3 committed Sep 20, 2024
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  3. update code

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    sunxd3 committed Sep 20, 2024
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Commits on Sep 22, 2024

  1. updates

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    sunxd3 committed Sep 22, 2024
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  2. rework the code; still not type stable

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    sunxd3 committed Sep 22, 2024
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  3. fix test

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    sunxd3 committed Sep 22, 2024
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  4. update doc -- need proofread

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    sunxd3 committed Sep 22, 2024
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  5. fix 1.6 struct field splatting compat issue

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    sunxd3 committed Sep 22, 2024
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Commits on Sep 27, 2024

  1. update code and doc

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    sunxd3 committed Sep 27, 2024
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Commits on Sep 28, 2024

  1. relax test error

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    sunxd3 committed Sep 28, 2024
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  2. rename gibbs markdown file

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    sunxd3 committed Sep 28, 2024
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  3. change title

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    sunxd3 committed Sep 28, 2024
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Commits on Oct 1, 2024

  1. update code and note

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    sunxd3 committed Oct 1, 2024
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  2. fix doc example

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    sunxd3 committed Oct 1, 2024
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  3. try to fix doc example error

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    sunxd3 committed Oct 1, 2024
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  4. fix doc deps

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    sunxd3 committed Oct 1, 2024
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  5. fix more doc example error

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    sunxd3 committed Oct 1, 2024
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  6. minor update

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    sunxd3 committed Oct 1, 2024
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Commits on Oct 3, 2024

  1. Apply suggestions from code review 

    Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>
    @sunxd3 @yebai
    sunxd3 and yebai authored Oct 3, 2024
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  2. Update docs/src/state_interface.md 

    Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>
    @sunxd3 @yebai
    sunxd3 and yebai authored Oct 3, 2024
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  3. Update docs/src/state_interface.md 

    Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>
    @sunxd3 @yebai
    sunxd3 and yebai authored Oct 3, 2024
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