Translational Bioinformatics at IGTP
- 4 followers
- Can Ruti Campus, Badalona, Barcelona, Spain
Popular repositories Loading
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CNVbenchmarkeR
CNVbenchmarkeR PublicFramework to benchmark algorithms when detecting germline copy number variations (CNVs) from NGS data
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karyoploteR
karyoploteR PublicForked from bernatgel/karyoploteR
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
R
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regioneR
regioneR PublicForked from bernatgel/regioneR
An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests
R
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CliffHunteR
CliffHunteR PublicForked from miriammagallon/CliffHunteR
CliffHunteR is a R package to detect drops in the coverage using BAM files. CliffHunteR detects putative SV breakpoints not detected by other SV callers
R
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Repositories
- CNVbenchmarkeR Public
Framework to benchmark algorithms when detecting germline copy number variations (CNVs) from NGS data
TranslationalBioinformaticsIGTP/CNVbenchmarkeR’s past year of commit activity - MagallonLorenz_2023_MPNST_cell_lines Public
Data and results generated for the paper "Deep genomic analysis of malignant peripheral nerve sheath tumor cell lines challenges current malignant peripheral nerve sheath tumor diagnosis" by Magallón-Lorenz et. al.
TranslationalBioinformaticsIGTP/MagallonLorenz_2023_MPNST_cell_lines’s past year of commit activity - CliffHunteR Public Forked from miriammagallon/CliffHunteR
CliffHunteR is a R package to detect drops in the coverage using BAM files. CliffHunteR detects putative SV breakpoints not detected by other SV callers
TranslationalBioinformaticsIGTP/CliffHunteR’s past year of commit activity - STARProtocols_Mazuelas_2022 Public
TranslationalBioinformaticsIGTP/STARProtocols_Mazuelas_2022’s past year of commit activity - karyoploteR Public Forked from bernatgel/karyoploteR
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
TranslationalBioinformaticsIGTP/karyoploteR’s past year of commit activity - regioneR Public Forked from bernatgel/regioneR
An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests
TranslationalBioinformaticsIGTP/regioneR’s past year of commit activity
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