Soil flux visualization

Plotting of soil CO₂ flux changes based on concentrations measured with eosFD device from Eosense.

Table of contents

• How to upload data
• Example plots
• Where to try app

Data upload

Simply just upload .csv file obtained from the eosFD device (see example csv file here). Any further table formatting is not necessary. Data can be easily filtered by date directly in the app.

App produces hrbrthemes flavoured plots of either CO₂ concentration in soil/atmosphere or CO₂ flux.

Plot types

Where to try app

There are two options to access the app:

• online web app hosted on labenvmicro.shinyapps.io
• or start your local installation of R language and paste following code which automatically downloads prerequisties and starts app:

install.packages(c("shiny", "shinythemes", "readr", "tidyverse", "Rmisc", "tools", "shinycssloaders", "showtext", "hrbrthemes", "devtools", "svglite"))
devtools::install_github("rstudio/fontawesome")
library(shiny)
runGitHub("Soil_flux_app", "Vojczech")