use micromamba in tests

.github/workflows/build_linux.yml

@@ -9,7 +9,7 @@ jobs:
   packages:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
     - name: Get tags
       run: git fetch --depth=1 origin +refs/tags/*:refs/tags/*

.github/workflows/build_mac.yml

@@ -15,7 +15,7 @@ jobs:
         python-version: ["3.8", "3.9", "3.10"]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
     - name: Get tags
       run: git fetch --depth=1 origin +refs/tags/*:refs/tags/*
@@ -49,7 +49,7 @@ jobs:
       shell: bash
 
     - name: upload wheel
-      uses: actions/upload-artifact@v1
+      uses: actions/upload-artifact@v3
       with:
         name: dist_${{ matrix.os }}_${{ matrix.python-version }}
         path: dist

.github/workflows/build_win.yml

@@ -15,7 +15,7 @@ jobs:
         python-version: ["3.8", "3.9", "3.10"]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
     - name: Get tags
       run: git fetch --depth=1 origin +refs/tags/*:refs/tags/*
@@ -49,7 +49,7 @@ jobs:
       shell: bash
 
     - name: upload wheel
-      uses: actions/upload-artifact@v1
+      uses: actions/upload-artifact@v3
       with:
         name: dist_${{ matrix.os }}_${{ matrix.python-version }}
         path: dist

.github/workflows/deploy-docs.yml

@@ -9,27 +9,26 @@ jobs:
   run:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@main
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
     - name: Create environment
       shell: bash -l {0}
       run: |
-        conda create --name TEST python=3 python-build numpy --file requirements-dev.txt
-        source activate TEST
+        micromamba create --name TEST python=3 python-build numpy --file requirements-dev.txt --channel conda-forge
+        micromamba activate TEST
         pip install -e . --no-deps --force-reinstall
         conda info --all
         conda list
 
     - name: Build documentation
       shell: bash -l {0}
       run: |
-        source activate TEST
+        micromamba activate TEST
         set -e
         pushd docs
         make clean html linkcheck

.github/workflows/pre-commit.yml

@@ -9,6 +9,6 @@ jobs:
   pre-commit:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v2
-    - uses: actions/setup-python@v2
+    - uses: actions/checkout@v3
+    - uses: actions/setup-python@v3
     - uses: pre-commit/action@v2.0.0

.github/workflows/tarball-tests.yml

@@ -9,26 +9,25 @@ jobs:
   run:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@main
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
     - name: Create environment
       shell: bash -l {0}
       run: |
-        conda create --name TEST python=3 python-build numpy --file requirements-dev.txt
-        source activate TEST
-        conda info --all
-        conda list
+        micromamba create --name TEST python=3 python-build numpy --file requirements-dev.txt --channel conda-forge
+        micromamba activate TEST
+        micromamba info --all
+        micromamba list
 
     - name: Tarball
       shell: bash -l {0}
       run: |
-        source activate TEST
+        micromamba activate TEST
         python -m build --skip-dependency-check --sdist --wheel .
         check-manifest --verbose
         twine check dist/*

.github/workflows/tests.yml

@@ -18,28 +18,28 @@ jobs:
         exclude:
           - python-version: "3.10"
             numpy-version: "1.19"
+      fail-fast: false
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
 
-    - name: Setup Conda
-      uses: s-weigand/setup-conda@v1
+    - name: Setup Micromamba
+      uses: mamba-org/provision-with-micromamba@main
       with:
-        activate-conda: false
-        conda-channels: conda-forge
+        environment-file: false
 
     - name: Python ${{ matrix.python-version }} numpy ${{ matrix.numpy-version }}
       shell: bash -l {0}
       run: |
-        conda create --name TEST python=${{ matrix.python-version }} python-build numpy=${{ matrix.numpy-version }} --file requirements-dev.txt
-        source activate TEST
+        micromamba create --name TEST python=${{ matrix.python-version }} python-build numpy=${{ matrix.numpy-version }} --file requirements-dev.txt --channel conda-forge
+        micromamba activate TEST
         pip install -e . --no-deps --force-reinstall
-        conda info --all
-        conda list
+        micromamba info --all
+        micromamba list
 
     - name: Tests
       shell: bash -l {0}
       run: |
-        source activate TEST
+        micromamba activate TEST
         python -c "import numpy; print(f'Running numpy {numpy.__version__}')"
         pytest -s -rxs -v gsw/tests