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gbtquick - Quick blobplots from assembly files

Parse assembly headers for coverage info per contig and generate blobplots without mapping. This is the lazy person's BlobToolKit

Supported assemblers:

  • SPAdes
  • Flye
  • Megahit

For anything else, use blobtools2

Optionally calculate coding density with Prodigal to discriminate prokaryotic from eukaryotic sequences.

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