Split Tests

.github/workflows/run-integration-tests.yml

@@ -0,0 +1,30 @@
+name: Run SpatialPy Integration Tests
+
+on:
+  push:
+    branches: [staging, develop]
+
+jobs:
+  run-tests:
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: [ ubuntu-latest ]
+
+    steps:
+    - name: Initialize environment
+      uses: actions/checkout@v2
+
+    - name: Install Python
+      uses: actions/setup-python@v2
+      with:
+        python-version: '3.7'
+
+    - name: Install Python dependencies
+      run: | 
+        python3 -m pip install --upgrade pip
+        python3 -m pip install -r requirements.txt
+        python3 -m pip install coverage
+
+    - name: Run tests
+      run: coverage run test/run_integration_tests.py

.github/workflows/run-tests.yml → .github/workflows/run-unit-tests.yml

@@ -25,4 +25,4 @@ jobs:
         python3 -m pip install coverage
 
     - name: Run tests
-      run: coverage run test/run_tests.py
+      run: coverage run test/run_unit_tests.py

test/run_tests.py → test/run_integration_tests.py

@@ -30,17 +30,11 @@
         print('Running tests in develop mode. Appending repository directory to system path.')
         sys.path.append(os.path.join(os.path.dirname(__file__), '..'))
 
-    import test_species
-    import test_parameter
-    import test_reaction
     import test_model
     import test_solver
     #import test_mincde
 
     modules = [
-        test_species,
-        test_parameter,
-        test_reaction,
         test_model,
         test_solver,
         #test_mincde,

test/run_unit_tests.py

@@ -0,0 +1,51 @@
+#!/usr/bin/env python3
+'''
+SpatialPy is a Python 3 package for simulation of
+spatial deterministic/stochastic reaction-diffusion-advection problems
+Copyright (C) 2019 - 2022 SpatialPy developers.
+
+This program is free software: you can redistribute it and/or modify
+it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as
+published by the Free Software Foundation.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+GNU GENERAL PUBLIC LICENSE Version 3 for more details.
+
+You should have received a copy of the GNU General Public License
+along with this program.  If not, see <http://www.gnu.org/licenses/>.
+'''
+
+import unittest, sys, os
+import argparse
+
+parser = argparse.ArgumentParser()
+parser.add_argument('-m', '--mode', default='develop', choices=['develop', 'release'],
+                    help='Run unit tests in develop mode or release mode.')
+
+if __name__ == '__main__':
+    args = parser.parse_args()
+    if args.mode == 'develop':
+        print('Running unit tests in develop mode. Appending repository directory to system path.')
+        sys.path.append(os.path.join(os.path.dirname(__file__), '..'))
+
+    import test_species
+    import test_parameter
+    import test_reaction
+
+    modules = [
+        test_species,
+        test_parameter,
+        test_reaction
+    ]
+
+    for module in modules:
+        suite = unittest.TestLoader().loadTestsFromModule(module)
+        runner = unittest.TextTestRunner(failfast=args.mode == 'develop')
+
+        print("Executing: {}".format(module))
+        result = runner.run(suite)
+        print('=' * 70)
+        if not result.wasSuccessful():
+            sys.exit(not result.wasSuccessful())