StatGenPRD
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StatGenPowerCalculationTools
StatGenPowerCalculationTools PublicReusable R code for power calculations commonly used in genetic association analysis.
R 3
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GWASImputationPipeline
GWASImputationPipeline PublicScripts for facilitating execution of previously published tools to infer additional genome-wide genotypes for subjects based on lab based genetic data for the subjects and publically available ref…
Python 1
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StatGenAnalysisPipeline
StatGenAnalysisPipeline PublicThis includes reusable R code for pharmacogenetic analyses and visualization of results. The analyses utilize commonly available statistical methods to investigate associations between clinical end…
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HIBAGImputation
HIBAGImputation PublicScripts for facilitating execution of HIBAG to infer classical HLA genotypes for subjects based on SNV genotypes using public domain reference datasets
R 3
Repositories
- STOPGAP Public
Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varying disease areas and supporting information. The integrated dataset is also included.
StatGenPRD/STOPGAP’s past year of commit activity - GWASImputationPipeline Public
Scripts for facilitating execution of previously published tools to infer additional genome-wide genotypes for subjects based on lab based genetic data for the subjects and publically available reference datasets.
StatGenPRD/GWASImputationPipeline’s past year of commit activity - HIBAGImputation Public
Scripts for facilitating execution of HIBAG to infer classical HLA genotypes for subjects based on SNV genotypes using public domain reference datasets
StatGenPRD/HIBAGImputation’s past year of commit activity - StatGenPowerCalculationTools Public
Reusable R code for power calculations commonly used in genetic association analysis.
StatGenPRD/StatGenPowerCalculationTools’s past year of commit activity - StatGenAnalysisPipeline Public
This includes reusable R code for pharmacogenetic analyses and visualization of results. The analyses utilize commonly available statistical methods to investigate associations between clinical endpoints and genetic data. The pipeline also includes any user scripts for running the code.
StatGenPRD/StatGenAnalysisPipeline’s past year of commit activity
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