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Merged
merged 93 commits into from
Jun 25, 2024
Merged

Add tests for windows and mac #2937

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b2164c9
great tests, good tests, the end of all test
h-mayorquin May 30, 2024
0d9536c
modify installation
h-mayorquin May 30, 2024
0741622
bash shell
h-mayorquin May 30, 2024
b97a079
eliminate mistake
h-mayorquin May 30, 2024
5ecf387
no need to prune when dealing with latest version
h-mayorquin May 30, 2024
28fea4b
no need for source environment
h-mayorquin May 30, 2024
2cf7668
no code coverage on this one
h-mayorquin May 30, 2024
16f6a5b
Merge branch 'main' into add_tests_for_all_os
h-mayorquin May 30, 2024
7a09691
added mac import fail quick
h-mayorquin May 30, 2024
e09aa61
add caching remove ubuntu
h-mayorquin May 31, 2024
89bc0d2
wrong type of cachcing, dumb mistake of mine
h-mayorquin May 31, 2024
37d93e1
correct command
h-mayorquin May 31, 2024
07460f6
separate test by module
h-mayorquin May 31, 2024
4e44122
permission for execution
h-mayorquin May 31, 2024
020551c
reduced testing
h-mayorquin May 31, 2024
1cc2bcb
forgot to avoid virtual env in core
h-mayorquin May 31, 2024
9982cfd
see origin of failure on windows
h-mayorquin May 31, 2024
1bd56e5
not fail fast to see windows mistery
h-mayorquin May 31, 2024
4b3e0a5
maybe shell issue on windows
h-mayorquin May 31, 2024
52be743
maybe shell issue on windows
h-mayorquin May 31, 2024
bf5c71e
fix windows collection by marker
h-mayorquin May 31, 2024
375e3d5
dumb marker error name
h-mayorquin May 31, 2024
282752b
faster to test mark collection this way
h-mayorquin May 31, 2024
fa7d9e8
fix mac test, enable the rest of tests
h-mayorquin May 31, 2024
1a544f8
equal assertion
h-mayorquin May 31, 2024
1e54a4b
sorter test
h-mayorquin May 31, 2024
8ed375f
try skipping core sorters
h-mayorquin May 31, 2024
e809edb
internal sorters is also failing
h-mayorquin Jun 1, 2024
f0e4c5c
restore core tests
h-mayorquin Jun 1, 2024
e56f2f0
restore conftest and container tools
h-mayorquin Jun 1, 2024
ed9ef1c
markers on widows not yet fixed
h-mayorquin Jun 1, 2024
7fb65c2
remove numba type signature (#2932)
zm711 May 30, 2024
d079d8a
fix marker collection to work on windows
h-mayorquin May 31, 2024
48f9fdb
easier fix that I do not like
h-mayorquin May 31, 2024
37ac47e
conftest fix
h-mayorquin May 31, 2024
7fd7b39
fix tee
h-mayorquin May 31, 2024
881d381
fix testing imports
h-mayorquin May 31, 2024
be00e9e
bunch of other imports
h-mayorquin May 31, 2024
8d80a6e
way more mport fixes
h-mayorquin May 31, 2024
251cd2d
even more removals
h-mayorquin May 31, 2024
7dda8c0
remove more imports
h-mayorquin May 31, 2024
701402f
even more removals
h-mayorquin May 31, 2024
d78c9c8
remove even more imports
h-mayorquin May 31, 2024
2fa06f3
remove even more imports
h-mayorquin May 31, 2024
15037b0
more pylab imports to the dustbin
h-mayorquin May 31, 2024
58a4ac0
more matplotlib terrible things]
h-mayorquin May 31, 2024
e366a45
isocut requires numba
h-mayorquin May 31, 2024
0fd14c4
more pandas and matplotlib
h-mayorquin May 31, 2024
ac6fa5a
more imports
h-mayorquin May 31, 2024
b394de1
truncated sv on clustering circus
h-mayorquin May 31, 2024
c08ff54
triage imports
h-mayorquin May 31, 2024
25a950e
more matplotlib
h-mayorquin May 31, 2024
6af7680
fix imports
h-mayorquin May 31, 2024
0b89fd7
restore nwb issue
h-mayorquin May 31, 2024
d845d23
Remove mearec from testing functions (#2930)
chrishalcrow May 31, 2024
8af34b7
missing scipy import
h-mayorquin May 31, 2024
2bdfe68
fix scipy import0
h-mayorquin May 31, 2024
2aa27c2
fix import error
h-mayorquin May 31, 2024
34c57c5
missing signal import
h-mayorquin May 31, 2024
c66f7d6
merge marker fix
h-mayorquin Jun 1, 2024
8a5366f
dumb comment that I left
h-mayorquin Jun 1, 2024
78edfb4
Merge branch 'main' into add_tests_for_all_os
h-mayorquin Jun 1, 2024
a7417bb
try extractors
h-mayorquin Jun 1, 2024
aef1e96
Merge remote-tracking branch 'refs/remotes/origin/add_tests_for_all_o…
h-mayorquin Jun 1, 2024
8e36972
try running only datalad check
h-mayorquin Jun 6, 2024
77d6e16
work in progress
h-mayorquin Jun 6, 2024
89c0e57
now working
h-mayorquin Jun 13, 2024
5ea1141
Merge branch 'main' into try_poo_instead_of_datalad
h-mayorquin Jun 13, 2024
f139f32
enable hashing
h-mayorquin Jun 14, 2024
0199677
Merge branch 'try_poo_instead_of_datalad' into add_tests_for_all_os
h-mayorquin Jun 14, 2024
b24a2b8
enable pooch for testing windows
h-mayorquin Jun 14, 2024
fda504a
windows posix fix
h-mayorquin Jun 14, 2024
238239c
add linux to tests
h-mayorquin Jun 14, 2024
29a2da9
plexon has a bug
h-mayorquin Jun 14, 2024
837eb85
internal sorters passing on windows
h-mayorquin Jun 14, 2024
a6a0e6e
skip bad test on windows
h-mayorquin Jun 14, 2024
73410f0
both sorter tests now passing
h-mayorquin Jun 14, 2024
594da45
skip plexon sorting test
h-mayorquin Jun 14, 2024
08dd62a
test simple datalad installation
h-mayorquin Jun 14, 2024
6f4e06a
Merge branch 'main' into add_tests_for_all_os
h-mayorquin Jun 14, 2024
b9d92f9
use catch for 500 errors simplify datalad instaltion even further
h-mayorquin Jun 14, 2024
f641872
restore editable install
h-mayorquin Jun 14, 2024
62286e7
add caching
h-mayorquin Jun 14, 2024
1725190
temporarily generation is not working, my fault
h-mayorquin Jun 14, 2024
2e3cb1c
improve hashing
h-mayorquin Jun 14, 2024
844c65d
Merge branch 'main' into add_tests_for_all_os
h-mayorquin Jun 18, 2024
8b3f4e4
Merge branch 'main' into add_tests_for_all_os
h-mayorquin Jun 19, 2024
b71bbd8
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Jun 19, 2024
34c0f8e
Update src/spikeinterface/extractors/tests/test_datalad_downloading.py
h-mayorquin Jun 19, 2024
5441ff4
Update src/spikeinterface/core/datasets.py
h-mayorquin Jun 19, 2024
2494c27
forgotten bash
h-mayorquin Jun 24, 2024
4905a0b
lower and higher versions
h-mayorquin Jun 25, 2024
bad309d
use restore to only restore the caches
h-mayorquin Jun 25, 2024
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forgot to avoid virtual env in core
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@h-mayorquin
h-mayorquin committed May 31, 2024
commit 1cc2bcbb1766f5b843dba6a3906cd1cf01e59fdd
2 changes: 1 addition & 1 deletion .github/workflows/all-tests.yml
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Expand Up @@ -78,7 +78,7 @@ jobs:
run: chmod +x .github/run_tests.sh
shell: bash
- name: Test core
run: ./.github/run_tests.sh core
run: ./.github/run_tests.sh core --no-virtual-env
shell: bash
- name: Test extractors
env:
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