Skip to content

Incompatible KS4 in singularity image #4001

Open
@AOONIH

Description

@AOONIH

Recently upgraded to 0.102.3. Sorting using singularity.

Get this error even though I'm pulling the latest kilosort docker image. I'm assuming singularity and docker are pulling the same image?

Exception: SpikeInterface only supports kilosort versions 4.0.16 and above. You 
are running version 4.0.12. To install the latest version, run:
                        >>> pip install kilosort --upgrade

I can bypass by specifying the kilosort version using the extra_requirements parameter but this seems like a bug to me

Metadata

Metadata

Assignees

No one assigned

    Labels

    containerIssues related to container (docker/singularity) versions of sorters

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions