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1 change: 1 addition & 0 deletions docs/source/conf.py
Original file line number Diff line number Diff line change
Expand Up @@ -28,6 +28,7 @@
"myst_parser",
"sphinx.ext.autodoc",
"sphinx.ext.napoleon",
"sphinx.ext.mathjax",
]

# Add any paths that contain templates here, relative to this directory.
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2 changes: 1 addition & 1 deletion docs/source/users_guide.md
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Expand Up @@ -11,7 +11,7 @@ The assumptions in this pipeline are as follows:
- All participants are assumed to have AP/PA dMRI acquisitions.
- All participants are assumed to have field map acquisitions.
- All participants are assumed to have T1w acquisitions.
- All participants are assumed to have $b = 3000$ s/mm^2 dMRI data.
- All participants are assumed to have $$b = 3000$$ s/mm^2 dMRI data.
- The data layout is kept consistent across runs: the only change may be in
the participant identifier in the folders and filenames.
- Generally, it is assumed that scripts are launched from a path where they
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