You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Warning messages:
1: did not converge in 10 iterations
2: did not converge in 10 iterations
3: did not converge in 10 iterations
4: did not converge in 10 iterations
5: did not converge in 10 iterations
6: did not converge in 10 iterations
7: did not converge in 10 iterations
8: did not converge in 10 iterations
9: did not converge in 10 iterations
10: did not converge in 10 iterations
11: did not converge in 10 iterations
12: did not converge in 10 iterations
13: did not converge in 10 iterations
14: did not converge in 10 iterations
15: did not converge in 10 iterations
16: did not converge in 10 iterations
17: did not converge in 10 iterations
18: did not converge in 10 iterations
19: did not converge in 10 iterations
Warning messages:
1: Quick-TRANSfer stage steps exceeded maximum (= 17474850)
2: did not converge in 10 iterations
3: Quick-TRANSfer stage steps exceeded maximum (= 20376350)
The text was updated successfully, but these errors were encountered:
How to increase iterations or solve the following problem?
anno <- SingleR(test = ourSCE,
ref = refSCE,
assay.type.test = "logcounts",
assay.type.ref = "logcounts",
labels = refSCE$cellType,
aggr.ref = TRUE)
Warning messages:
1: did not converge in 10 iterations
2: did not converge in 10 iterations
3: did not converge in 10 iterations
4: did not converge in 10 iterations
5: did not converge in 10 iterations
6: did not converge in 10 iterations
7: did not converge in 10 iterations
8: did not converge in 10 iterations
9: did not converge in 10 iterations
10: did not converge in 10 iterations
11: did not converge in 10 iterations
12: did not converge in 10 iterations
13: did not converge in 10 iterations
14: did not converge in 10 iterations
15: did not converge in 10 iterations
16: did not converge in 10 iterations
17: did not converge in 10 iterations
18: did not converge in 10 iterations
19: did not converge in 10 iterations
Warning messages:
1: Quick-TRANSfer stage steps exceeded maximum (= 17474850)
2: did not converge in 10 iterations
3: Quick-TRANSfer stage steps exceeded maximum (= 20376350)
The text was updated successfully, but these errors were encountered: