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@SingleR-inc

SingleR-inc

Code and resources for the SingleR method
README.md

Cell type annotation for single-cell data

This organization manages the code for the SingleR Bioconductor package and associated resources. (No, we're not really a corporation, it's just that the @SingleR handle was already taken.)

To get started, check out one or more of the links below:

Python users may also be interested in the Python implementation.

The cool logo was derived from the sticker for the package.

Popular repositories Loading

  1. SingleR SingleR Public

    Clone of the Bioconductor repository for the SingleR package.

    R 177 19

  2. celldex celldex Public

    Collection of cell type reference datasets.

    R 46 7

  3. SingleRBook-base SingleRBook-base Public archive

    See https://github.com/LTLA/SingleRBook for the latest version of this content.

    TeX 11 8

  4. SingleRBook SingleRBook Public

    The package wrapping the book, for deployment via the Bioconductor build system.

    TeX 5 1

  5. singlepp singlepp Public

    Pure C++ implementation of the SingleR method for cell type annotation

    C++ 1

  6. SingleRBook-old SingleRBook-old Public archive

    Old compiled version of the SingleR book.

Repositories

Showing 8 of 8 repositories
  • SingleR Public

    Clone of the Bioconductor repository for the SingleR package.

    SingleR-inc/SingleR’s past year of commit activity
    R 177 GPL-3.0 19 14 0 Updated Oct 28, 2024
  • singlepp Public

    Pure C++ implementation of the SingleR method for cell type annotation

    SingleR-inc/singlepp’s past year of commit activity
    C++ 1 MIT 0 1 0 Updated Oct 10, 2024
  • singlepp_loaders Public

    Load reference datasets for SingleR

    SingleR-inc/singlepp_loaders’s past year of commit activity
    C++ 0 MIT 0 0 0 Updated Oct 9, 2024
  • SingleRBook Public

    The package wrapping the book, for deployment via the Bioconductor build system.

    SingleR-inc/SingleRBook’s past year of commit activity
    TeX 5 1 0 0 Updated Sep 7, 2024
  • celldex Public

    Collection of cell type reference datasets.

    SingleR-inc/celldex’s past year of commit activity
    R 46 7 14 0 Updated May 31, 2024
  • .github Public

    Organization overview.

    SingleR-inc/.github’s past year of commit activity
    0 MIT 0 0 0 Updated May 31, 2024
  • SingleRBook-base Public archive

    See https://github.com/LTLA/SingleRBook for the latest version of this content.

    SingleR-inc/SingleRBook-base’s past year of commit activity
    TeX 11 8 1 0 Updated Jun 21, 2022
  • SingleRBook-old Public archive

    Old compiled version of the SingleR book.

    SingleR-inc/SingleRBook-old’s past year of commit activity
    0 0 0 0 Updated Nov 2, 2020

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