v1.2.6

What's Changed

• Improve CI/CD for uploading image to GHCR by @mdbarnesUCSD in #291
• v1.2.6: Update default COSMIC version to 3.5 by @mdbarnesUCSD in #295

Full Changelog: v1.2.5...v1.2.6

v1.2.5

What's Changed

• v1.2.5: Add automated Docker build and publish pipeline by @mdbarnesUCSD in #290

Full Changelog: v1.2.4...v1.2.5

v1.2.4

What's Changed

• v1.2.4: Added assignment_cpu parameter for SigProfilerAssignment v1.0… by @mdbarnesUCSD in #289

Full Changelog: v1.2.3...v1.2.4

v1.2.3

What's Changed

• v1.2.3: Add support for rn7 and mm39 genomes by @mdbarnesUCSD in #284

Full Changelog: v1.2.2...v1.2.3

v1.2.2

What's Changed

• Stop parameter by @mdbarnesUCSD in #277
• Add mutation count and stability to SBS4608 plots by @mdbarnesUCSD in #278
• Development by @mdbarnesUCSD in #279

Full Changelog: v1.2.1...v1.2.2

v1.2.1

What's Changed

• v1.2.1: Fix CLI non-zero exit code issue by @mdbarnesUCSD in #272

Full Changelog: v1.2.0...v1.2.1

v1.2.0

What's Changed

• Pandas and Numpy Upgrade by @mdbarnesUCSD in #268
• Requires Pandas and Numpy >= 2.0.0 and Python >= 3.9

Full Changelog: v1.1.25...v1.2.0

v1.1.25

What's Changed

• Fix CI/CD badge by @mdbarnesUCSD in #265
• Spe cli by @mdbarnesUCSD in #266

Full Changelog: v1.1.24...v1.1.25

v1.1.24

Changes Made:

• Applied Black automatic formatting.
• Utilized SigProfilerPlotting's process_input function to process input data.
• Updated requirements:
  • SigProfilerMatrixGenerator:
    • Upgraded from version 1.2.17 to 1.2.25.
  • SigProfilerPlotting:
    • Upgraded from version 1.3.16 to 1.3.22.
  • SigProfilerAssignment:
    • Upgraded from version 0.1.0 to 0.1.4.

These updates aim to enhance code readability, maintainability, and ensure compatibility with the latest versions of the required dependencies.

v1.1.23

What's Changed

• COSMIC V3.4 Update by @mdbarnesUCSD in #226

Full Changelog: v1.1.22...v1.1.23