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  1. HIV-64148 HIV-64148 Public

    HIV-64148, an integration of multiple long-read genome assemblers with a pipeline for analysis of HIV-1 genomic data from Oxford Nanopore Sequencing Technology or PacBio Real-Time (SMRT) Sequencing…

    Python 2

  2. NosoGraph NosoGraph Public

    Assembly pipeline + Neo4j knowledge graph linking clinical, microbial, and genomic data for infectious-disease.

    Python

  3. ViroWatch ViroWatch Public

    ViroWatch: HIV-1 ONT genome surveillance pipeline

    HTML

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