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Modifies data for shaded plots to use the centre of the Bayes distribution #114

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Merged
DrPaulSharp merged 4 commits into from
Jan 14, 2025
Merged

Modifies data for shaded plots to use the centre of the Bayes distribution #114

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fdb9ddf
Changes bayes plots to use mean reflectivity and SLD
DrPaulSharp Jan 10, 2025
53ba9b8
Updates tests
DrPaulSharp Jan 13, 2025
b2081a8
Bug fix in q4 shaded plot
DrPaulSharp Jan 13, 2025
3833bbd
Addresses review comment
DrPaulSharp Jan 14, 2025
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Updates tests
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@DrPaulSharp
DrPaulSharp committed Jan 13, 2025
commit 53ba9b8908b29499f9e22ee7ed62eeaf5c0d4f95
20 changes: 0 additions & 20 deletions tests/conftest.py
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Original file line number Diff line number Diff line change
Expand Up @@ -1827,7 +1827,6 @@ def dream_bayes():
9.14706158e-07,
9.14597081e-07,
9.14576711e-07,
9.14569865e-07,
],
[
-2.26996619e-06,
Expand Down Expand Up @@ -1859,7 +1858,6 @@ def dream_bayes():
9.14706158e-07,
9.14597081e-07,
9.14576711e-07,
9.14569865e-07,
],
[
-1.50598689e-07,
Expand Down Expand Up @@ -1891,7 +1889,6 @@ def dream_bayes():
3.33756709e-06,
3.33751126e-06,
3.33750083e-06,
3.33749733e-06,
],
[
2.07300000e-06,
Expand Down Expand Up @@ -1923,7 +1920,6 @@ def dream_bayes():
5.87958511e-06,
5.87958515e-06,
5.87958515e-06,
5.87958515e-06,
],
[
2.07300000e-06,
Expand Down Expand Up @@ -1955,7 +1951,6 @@ def dream_bayes():
5.87958511e-06,
5.87958515e-06,
5.87958515e-06,
5.87958515e-06,
],
],
),
Expand Down Expand Up @@ -1991,7 +1986,6 @@ def dream_bayes():
4.65378471e-06,
4.65378475e-06,
4.65378475e-06,
4.65378475e-06,
],
[
-1.35107208e-06,
Expand Down Expand Up @@ -2023,7 +2017,6 @@ def dream_bayes():
4.65378471e-06,
4.65378475e-06,
4.65378475e-06,
4.65378475e-06,
],
[
3.19875093e-07,
Expand Down Expand Up @@ -2055,7 +2048,6 @@ def dream_bayes():
4.92196879e-06,
4.92248720e-06,
4.92261931e-06,
4.92266441e-06,
],
[
2.07300000e-06,
Expand Down Expand Up @@ -2087,7 +2079,6 @@ def dream_bayes():
5.17758173e-06,
5.17859423e-06,
5.17885226e-06,
5.17894035e-06,
],
[
2.07300000e-06,
Expand Down Expand Up @@ -2119,7 +2110,6 @@ def dream_bayes():
5.17758173e-06,
5.17859423e-06,
5.17885226e-06,
5.17894035e-06,
],
],
),
Expand Down Expand Up @@ -4140,7 +4130,6 @@ def dream_results():
9.14706158e-07,
9.14597081e-07,
9.14576711e-07,
9.14569865e-07,
],
[
-2.26996619e-06,
Expand Down Expand Up @@ -4172,7 +4161,6 @@ def dream_results():
9.14706158e-07,
9.14597081e-07,
9.14576711e-07,
9.14569865e-07,
],
[
-1.50598689e-07,
Expand Down Expand Up @@ -4204,7 +4192,6 @@ def dream_results():
3.33756709e-06,
3.33751126e-06,
3.33750083e-06,
3.33749733e-06,
],
[
2.07300000e-06,
Expand Down Expand Up @@ -4236,7 +4223,6 @@ def dream_results():
5.87958511e-06,
5.87958515e-06,
5.87958515e-06,
5.87958515e-06,
],
[
2.07300000e-06,
Expand Down Expand Up @@ -4268,7 +4254,6 @@ def dream_results():
5.87958511e-06,
5.87958515e-06,
5.87958515e-06,
5.87958515e-06,
],
]
),
Expand Down Expand Up @@ -4304,7 +4289,6 @@ def dream_results():
4.65378471e-06,
4.65378475e-06,
4.65378475e-06,
4.65378475e-06,
],
[
-1.35107208e-06,
Expand Down Expand Up @@ -4336,7 +4320,6 @@ def dream_results():
4.65378471e-06,
4.65378475e-06,
4.65378475e-06,
4.65378475e-06,
],
[
3.19875093e-07,
Expand Down Expand Up @@ -4368,7 +4351,6 @@ def dream_results():
4.92196879e-06,
4.92248720e-06,
4.92261931e-06,
4.92266441e-06,
],
[
2.07300000e-06,
Expand Down Expand Up @@ -4400,7 +4382,6 @@ def dream_results():
5.17758173e-06,
5.17859423e-06,
5.17885226e-06,
5.17894035e-06,
],
[
2.07300000e-06,
Expand Down Expand Up @@ -4432,7 +4413,6 @@ def dream_results():
5.17758173e-06,
5.17859423e-06,
5.17885226e-06,
5.17894035e-06,
],
]
),
Expand Down
4 changes: 2 additions & 2 deletions tests/test_outputs.py
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Original file line number Diff line number Diff line change
Expand Up @@ -85,7 +85,7 @@ def dream_str():
"'Background parameter D2O', 'Background parameter SMW', 'D2O', 'SMW'],\n"
"predictionIntervals = PredictionIntervals(\n"
"\treflectivity = [Data array: [5 x 21], Data array: [5 x 21]],\n"
"\tsld = [[Data array: [5 x 30], Data array: [5 x 30]]],\n"
"\tsld = [[Data array: [5 x 29], Data array: [5 x 29]]],\n"
"\tsampleChi = Data array: [1000],\n"
"),\n"
"confidenceIntervals = ConfidenceIntervals(\n"
Expand Down Expand Up @@ -191,7 +191,7 @@ def test_make_results(test_procedure, test_output_results, test_bayes, test_resu
@pytest.mark.parametrize(
["test_output_results", "test_str"],
[
# ("reflectivity_calculation_results", "reflectivity_calculation_str"),
("reflectivity_calculation_results", "reflectivity_calculation_str"),
("dream_results", "dream_str"),
],
)
Expand Down
8 changes: 6 additions & 2 deletions tests/test_plotting.py
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Original file line number Diff line number Diff line change
Expand Up @@ -207,10 +207,14 @@ def test_plot_ref_sld(mock: MagicMock, input_project, reflectivity_calculation_r
assert figure.axes[0].get_subplotspec().get_gridspec().get_geometry() == (1, 2)
assert len(figure.axes) == 2

for reflectivity, reflectivity_results in zip(data.reflectivity, reflectivity_calculation_results.reflectivity):
assert (reflectivity == reflectivity_results).all()
for sldProfile, result_sld_profile in zip(data.sldProfiles, reflectivity_calculation_results.sldProfiles):
for sld, sld_results in zip(sldProfile, result_sld_profile):
assert (sld == sld_results).all()

assert data.modelType == input_project.model
assert data.reflectivity == reflectivity_calculation_results.reflectivity
assert data.shiftedData == reflectivity_calculation_results.shiftedData
assert data.sldProfiles == reflectivity_calculation_results.sldProfiles
assert data.resampledLayers == reflectivity_calculation_results.resampledLayers
assert data.dataPresent.size == 0
assert (data.subRoughs == reflectivity_calculation_results.contrastParams.subRoughs).all()
Expand Down
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