Command reference --version fails for specific versions

[christopher-mohr]

Hi,

The command arcasHLA reference --version fails for specific versions (it seems like every reference > 3.34.0).

arcasHLA reference --version 3.35.0 -v

--------------------------------------------------------------------------------
[reference] Checking out IMGT/HLA:

	git -C /opt/miniconda3/envs/test_arcas/share/arcas-hla-0.5.0-1/scripts/../dat/IMGTHLA/ checkout -f 870e39341592de0113c530f471098490a246ac24

	Previous HEAD position was af8f6da IPD-IMGT/HLA Release 3.36.0
	HEAD is now at 870e393 Moving to hml subdir in ihiw
	
[reference] IMGT/HLA database version:

870e39341592de0113c530f471098490a246ac24

[reference] Processing IMGT/HLA database
[reference] Error: dat/IMGTHLA/hla.dat empty or corrupted.

I installed arcasHLA using conda (bioconda/noarch::arcas-hla-0.5.0-hdfd78af_1).

Best regards
Christopher

[tdfy]

@christopher-mohr any luck resolving this? Having the same issue.

[tdfy]

this sorted me out:
https://github.com/RabadanLab/arcasHLA/issues/42

[christopher-mohr]

this sorted me out: https://github.com/RabadanLab/arcasHLA/issues/42

@tdfy Since I installed it using conda I would expect that this is not necessary. I guess the recipe might need an update then.