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36 Open 77 Closed
36 Open 77 Closed
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Issues list

new version of kallisto outputs have changed
#138 opened Sep 23, 2024 by katahdin0
samtools and kallisto versions not found
#137 opened Aug 23, 2024 by arusa
2
Failure to check exit codes of run_command causes a hang
#135 opened Aug 6, 2024 by pshaughn
pseudoalignments.tsv error
#134 opened Jun 16, 2024 by Bondada20
1
IMGT/HLA version 3.56.0 and onwards provides large files as zip files
#133 opened Apr 26, 2024 by Carovanandel
2
unable to install arcasHLA in M3 Mac under conda.
#131 opened Apr 17, 2024 by jasoncrucify
No HLA name file
#130 opened Apr 14, 2024 by arghdan
1
arcasHLA reference error with IMGTHLA>3.34.0
#129 opened Apr 3, 2024 by Tesson98
Giving path to reference dataset in genotype command
#127 opened Mar 21, 2024 by Carovanandel
TypeError: only integer scalar arrays can be converted to a scalar index
#126 opened Feb 29, 2024 by Weiyifan
1
Donor/Recipient
#124 opened Feb 28, 2024 by pwmellors
0 reads mapped to a single HLA gene
#119 opened Feb 1, 2024 by tequilasunrise0
Problems running customize
#117 opened Jan 2, 2024 by bozbezbozzel
@abuendia
2
Some alles alleles did not be inferred ？
#115 opened Dec 15, 2023 by Portulaca666
1
Frequent reporting of a null allele for 10X data
#114 opened Nov 29, 2023 by vincentwalter
arcasHLA customize not working
#111 opened Sep 20, 2023 by staedlern
1
Getting empty fastq files after partial typing
#106 opened Jun 12, 2023 by mahlaranjeet
1
intermediate alignment issue
#105 opened May 29, 2023 by sulevk
hla.p.json error
#104 opened Mar 26, 2023 by JiguuP
1
what's the difference between the genotype and partial parameters ?
#103 opened Mar 22, 2023 by jingydz
gene without cDNA sequence causes error when running quant.py
#102 opened Mar 2, 2023 by adeschen
quant.py error: FileNotFoundError: [Errno 2] No such file or directory: 'dat/ref/hla.p'
#101 opened Jan 20, 2023 by ahmadalajami
1
Can you pass DNA-seq data to arcasHLA?
#100 opened Jan 13, 2023 by dennis-serum
Can we add new population?
#99 opened Jan 7, 2023 by yyoshiaki
1
Only one extracted file
#98 opened Jan 6, 2023 by yuchenino
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