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Introduces a new Files view tab in Skyline that displays and manages all files related to the current document (spectral libraries, background proteomes, chromatogram caches, audit logs, replicate files, etc.).

The view includes file system monitoring, background operations, drag-and-drop organization, and visual indicators for missing files.

  • 64.8% code coverage with 4 comprehensive test classes
  • All tests passing
  • Test data cleanup: removed empty SkylineWindowEventsTest.zip, reduced FilesTreeFormTest.zip from 87 MB to ~1 MB
  • Cleaned up from original PR Files View #3334

For complete details, see: ai/todos/active/TODO-20251126_files_view.md

Closes #3334

Introduces a new Files view tab in Skyline that displays and manages all
files related to the current document (spectral libraries, background
proteomes, chromatogram caches, audit logs, replicate files, etc.).

The view includes file system monitoring, background operations,
drag-and-drop organization, and visual indicators for missing files.

- 64.8% code coverage with 4 comprehensive test classes
- All tests passing
- Test data cleanup: removed empty SkylineWindowEventsTest.zip, reduced
  FilesTreeFormTest.zip from 87 MB to ~1 MB
- Cleaned up from original PR #3334

For complete details, see: ai/todos/active/TODO-20251126_files_view.md

Closes #3334
@brendanx67 brendanx67 marked this pull request as draft November 27, 2025 15:00
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2 participants