Skip to content

Commit

Permalink
ENH: Allow newer version of dependencies
Browse files Browse the repository at this point in the history
Pinning basic packages such as "requests" to a specific patch level release such "2.31.0" is too strict. New releases and especially new patch releases allow to use latest security updates of various packages.

Signed-off-by: James Butler <james.butler@revvity.com>
  • Loading branch information
jamesobutler committed Oct 7, 2024
1 parent b85d6b1 commit 436102c
Show file tree
Hide file tree
Showing 2 changed files with 64 additions and 64 deletions.
64 changes: 32 additions & 32 deletions requirements.txt
Original file line number Diff line number Diff line change
Expand Up @@ -10,40 +10,40 @@
# limitations under the License.

monai[nibabel, skimage, pillow, tensorboard, gdown, ignite, torchvision, itk, tqdm, lmdb, psutil, openslide, fire, mlflow]>=1.3.1
uvicorn==0.29.0
pydantic==2.7.0
pydantic-settings==2.2.1
python-dotenv==1.0.1
fastapi==0.110.2
python-multipart==0.0.9
httpx==0.27.0
schedule==1.2.1
dicomweb-client[gcp]==0.59.1
timeloop==1.0.2
expiringdict==1.2.2
expiring_dict==1.1.0
cachetools==5.3.3
watchdog==4.0.0
pydicom==2.4.4
pydicom-seg==0.4.1
pynetdicom==2.0.2
pynrrd==1.0.0
numpymaxflow==0.0.6
girder-client==3.2.3
ninja==1.11.1.1
einops==0.7.0
pyyaml==6.0.1
filelock==3.11.0
passlib==1.7.4
pyjwt==2.8.0
bcrypt==4.1.2
shapely==2.0.4
requests==2.31.0
requests-toolbelt==1.0.0
urllib3==2.2.1
uvicorn>=0.29.0
pydantic>=2.7.0
pydantic-settings>=2.2.1
python-dotenv>=1.0.1
fastapi>=0.110.2
python-multipart>=0.0.9
httpx>=0.27.0
schedule>=1.2.1
dicomweb-client[gcp]>=0.59.1
timeloop>=1.0.2
expiringdict>=1.2.2
expiring_dict>=1.1.0
cachetools>=5.3.3
watchdog>=4.0.0
pydicom>=2.4.4
pydicom-seg>=0.4.1
pynetdicom>=2.0.2
pynrrd>=1.0.0
numpymaxflow>=0.0.6
girder-client>=3.2.3
ninja>=1.11.1.1
einops>=0.7.0
pyyaml>=6.0.1
filelock>=3.11.0
passlib>=1.7.4
pyjwt>=2.8.0
bcrypt>=4.1.2
shapely>=2.0.4
requests>=2.31.0
requests-toolbelt>=1.0.0
urllib3>=2.2.1
scikit-learn
scipy
google-auth==2.29.0
google-auth>=2.29.0


# scipy and scikit-learn latest packages are missing on python 3.8
Expand Down
64 changes: 32 additions & 32 deletions setup.cfg
Original file line number Diff line number Diff line change
Expand Up @@ -36,40 +36,40 @@ setup_requires =
ninja
install_requires =
monai[nibabel, skimage, pillow, tensorboard, gdown, ignite, torchvision, itk, tqdm, lmdb, psutil, openslide, fire, mlflow]>=1.3.1
uvicorn==0.29.0
pydantic==2.7.0
pydantic-settings==2.2.1
python-dotenv==1.0.1
fastapi==0.110.2
python-multipart==0.0.9
httpx==0.27.0
schedule==1.2.1
dicomweb-client[gcp]==0.59.1
timeloop==1.0.2
expiringdict==1.2.2
expiring_dict==1.1.0
cachetools==5.3.3
watchdog==4.0.0
pydicom==2.4.4
pydicom-seg==0.4.1
pynetdicom==2.0.2
pynrrd==1.0.0
numpymaxflow==0.0.6
girder-client==3.2.3
ninja==1.11.1.1
einops==0.7.0
pyyaml==6.0.1
filelock==3.11.0
passlib==1.7.4
pyjwt==2.8.0
bcrypt==4.1.2
shapely==2.0.4
requests==2.31.0
requests-toolbelt==1.0.0
urllib3==2.2.1
uvicorn>=0.29.0
pydantic>=2.7.0
pydantic-settings>=2.2.1
python-dotenv>=1.0.1
fastapi>=0.110.2
python-multipart>=0.0.9
httpx>=0.27.0
schedule>=1.2.1
dicomweb-client[gcp]>=0.59.1
timeloop>=1.0.2
expiringdict>=1.2.2
expiring_dict>=1.1.0
cachetools>=5.3.3
watchdog>=4.0.0
pydicom>=2.4.4
pydicom-seg>=0.4.1
pynetdicom>=2.0.2
pynrrd>=1.0.0
numpymaxflow>=0.0.6
girder-client>=3.2.3
ninja>=1.11.1.1
einops>=0.7.0
pyyaml>=6.0.1
filelock>=3.11.0
passlib>=1.7.4
pyjwt>=2.8.0
bcrypt>=4.1.2
shapely>=2.0.4
requests>=2.31.0
requests-toolbelt>=1.0.0
urllib3>=2.2.1
scikit-learn
scipy
google-auth==2.29.0
google-auth>=2.29.0

[flake8]
select = B,C,E,F,N,P,T4,W,B9
Expand Down

0 comments on commit 436102c

Please sign in to comment.