Feat/log/clean up (#584)

* • System - show_graph(): fixed bug producing empty image for graphs with just one Mechanism added auto-recurrent projections * • Log - added numpy_array output method * - * - * - * - * - * - * - * - * - * -
PrincetonUniversity · Dec 10, 2017 · fdb6abb · fdb6abb
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diff --git a/.idea/runConfigurations/Make_HTML.xml b/.idea/runConfigurations/Make_HTML.xml
diff --git a/.idea/runConfigurations/Scratch_Pad.xml b/.idea/runConfigurations/Scratch_Pad.xml
diff --git a/.idea/runConfigurations/Tests.xml b/.idea/runConfigurations/Tests.xml
diff --git a/.idea/runConfigurations/_Gating_Mechanism.xml b/.idea/runConfigurations/_Gating_Mechanism.xml
diff --git a/.idea/runConfigurations/_GilzenratModel.xml b/.idea/runConfigurations/_GilzenratModel.xml
diff --git a/.idea/runConfigurations/_Mixed_NN_and_DDM.xml b/.idea/runConfigurations/_Mixed_NN_and_DDM.xml
diff --git a/.idea/runConfigurations/_Multilayer_Learning.xml b/.idea/runConfigurations/_Multilayer_Learning.xml
diff --git a/.idea/runConfigurations/_Reinforcement_Learning.xml b/.idea/runConfigurations/_Reinforcement_Learning.xml
diff --git a/.idea/runConfigurations/_Stroop_Simple.xml b/.idea/runConfigurations/_Stroop_Simple.xml
diff --git a/...SpecificationFormats_test_2_item_tuple_from_input_and_output_states_to_gating_signals.xml b/...SpecificationFormats_test_2_item_tuple_from_input_and_output_states_to_gating_signals.xml
diff --git a/.idea/runConfigurations/py_test_for_tests_control_test_EVC_test_EVC.xml b/.idea/runConfigurations/py_test_for_tests_control_test_EVC_test_EVC.xml
diff --git a/...y_test_for_tests_documentation_library_test_lib_mechanism_docs_test_lc_mechanism_docs.xml b/...y_test_for_tests_documentation_library_test_lib_mechanism_docs_test_lc_mechanism_docs.xml
diff --git a/...cifications_TestProjectionSpecificationFormats_test_formats_for_control_specification.xml b/...cifications_TestProjectionSpecificationFormats_test_formats_for_control_specification.xml
diff --git a/...ecifications_TestProjectionSpecificationFormats_test_formats_for_gating_specification.xml b/...ecifications_TestProjectionSpecificationFormats_test_formats_for_gating_specification.xml
diff --git a/...ProjectionSpecificationFormats_test_mapping_projection_with_mech_and_state_name_specs.xml b/...ProjectionSpecificationFormats_test_mapping_projection_with_mech_and_state_name_specs.xml
diff --git a/.idea/runConfigurations/py_test_in_test_lib_mechanism_docs_py.xml b/.idea/runConfigurations/py_test_in_test_lib_mechanism_docs_py.xml