clean deps

[mikasenghaas]

cleans up pyproject:

• remove all non-direct deps (locked versions should persist tho)
• if not installing from other sources than git (e.g. git) remove version pin
• verifiers v0.10.0
• add up-to-date prime version and pyproject

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Note

Medium Risk
Dependency and lockfile changes can alter the resolved environment and runtime behavior even without code changes, especially with the prime upgrade and removed packages.

Overview
Updates project metadata in pyproject.toml (version 0.4.0, adds a description) and prunes/reshapes runtime dependencies to focus on direct requirements, while adding a few explicit runtime deps (e.g. torchdata, pyzmq, aiolimiter, tenacity) and adjusting source specs for git/index packages.

Refreshes uv.lock accordingly: removes many previously locked transitive/unused packages, bumps prime (0.5.24 → 0.5.33), and updates the dion git reference format/revision.

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