Description
Describe the issue
Hi, I am trying to generate a Lollipop plot for DSEL, however, it is throwing the error that many others have faced before. @PoisonAlien could you kindly add the same with the following information/link:
https://www.uniprot.org/uniprotkb/Q8IZU8
Command
lollipopPlot( maf = LH_No_raw, gene = 'DSEL', AACol = 'HGVSp_Short', showMutationRate = TRUE, labelPos=NULL, pointSize=2.5)
Session info
R version 4.3.0 (2023-04-21)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 22.04.2 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.10.0
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.10.0
locale:
[1] LC_CTYPE=en_IN.UTF-8 LC_NUMERIC=C LC_TIME=en_IN.UTF-8 LC_COLLATE=en_IN.UTF-8
[5] LC_MONETARY=en_IN.UTF-8 LC_MESSAGES=en_IN.UTF-8 LC_PAPER=en_IN.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=en_IN.UTF-8 LC_IDENTIFICATION=C
time zone: Asia/Kolkata
tzcode source: system (glibc)
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] maftools_2.15.0
loaded via a namespace (and not attached):
[1] RColorBrewer_1.1-3 R6_2.5.1 Matrix_1.5-1 lattice_0.20-45 splines_4.3.0
[6] gtable_0.3.3 glue_1.6.2 lifecycle_1.0.3 pheatmap_1.0.12 cli_3.6.1
[11] scales_1.2.1 grid_4.3.0 data.table_1.14.8 compiler_4.3.0 rstudioapi_0.14
[16] tools_4.3.0 munsell_0.5.0 survival_3.5-3 colorspace_2.1-0 BiocManager_1.30.20
[21] DNAcopy_1.73.0 rlang_1.1.0
Activity