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Commits on Feb 14, 2023

• Reduce time-tracking overhead (#1988)

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  dweindl

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  Fabian Fröhlich

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Commits on Jan 18, 2023

• log all nested execution times as debug (#1947)

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  FFroehlich

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• increase reference times for most common failures (#1945)

  FFroehlich

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Commits on Dec 14, 2022

• Evaluate runtimes for benchmark models (#1912)

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  FFroehlich

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Commits on Dec 11, 2022

• Run cmake-format (#1910)

  dweindl

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Commits on Nov 24, 2022

• Fix performance test warnings (#1900)

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  dweindl

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Commits on Nov 21, 2022

• Add operator== for ExpData (#1881)

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  dweindl

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Commits on Sep 10, 2022

• Add function to convert `ReturnData::status` flags to string (#1864)

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Commits on Aug 22, 2022

• Extract common subexpressions (#1852)

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  dweindl

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Commits on Aug 1, 2022

• Fix performance test (#1839)

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Commits on Jul 19, 2022

• CI: Allow more time for building sdist

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Commits on Jul 11, 2022

• CI: Fix petab vis import (#1825)

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Commits on May 21, 2022

• CI: Fix some libgcov errors (#1802)

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Commits on May 4, 2022

• fix initial events, fixes #1760 (#1789)

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  Fabian Fröhlich

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  dweindl

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Commits on Apr 28, 2022

• More informative NaN/Inf warnings (#1640)

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Commits on Apr 8, 2022

• Fix Rule-handling in PEtab import (#1753)

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  dweindl

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• CI: Automatically detect available SBML semantic test cases (#1773)

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Commits on Apr 7, 2022

• Steady state tolerance factor (#1758)

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  dilpath

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  dweindl

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• Update petab test suite code (#1768)

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Commits on Apr 5, 2022

• Steady state sensitivity modes (#1727)

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Commits on Mar 28, 2022

• CI: performance test, increase time for adjoint simulation to 2.5s

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Commits on Mar 25, 2022

• Remove legacy options/members `amioption.newton_preeq` and `Solver::r… (#1744)

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Commits on Mar 19, 2022

• Cleanup steadystate (#1732)

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Commits on Mar 16, 2022

• remove SPBCG solver (#1729)

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  Fabian Fröhlich

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Commits on Mar 14, 2022

• Use sparse matrix multiplications for stotal_cl (#1720)

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  dweindl

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Commits on Mar 13, 2022

• Use sparse matrix multiplications for sx_rdata (#1719)

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  Fabian Fröhlich

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  dweindl

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Commits on Mar 12, 2022

• CI: performance test - increase time for creating sdist

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Commits on Mar 4, 2022

• Add support for observable-dependent sigmas (#1692)

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  dweindl

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  Fabian Fröhlich

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Commits on Feb 23, 2022

• Support for parameter-dependent conservation laws (#1678)

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  dweindl

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  Fabian Fröhlich

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Commits on Feb 19, 2022

• Cleanup tests/testSBMLSuite.py (#1676)

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Commits on Jan 12, 2022

• Drop Python3.7 support (#1635)

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Commits on Dec 15, 2021

• Add `id` field to ExpData and ReturnData (#1622)

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Commits on Dec 6, 2021

• Remove assert_fun argument from gradient checking, improve output (#1609)

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  dweindl

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  Fabian Fröhlich

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Commits on Dec 1, 2021

• Require sympy>=1.9,pysb>=1.13.1 / update Heaviside (#1599)

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  dweindl

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  FFroehlich

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Commits on Nov 18, 2021

• maint: Enable ninja-based builds (#1593)

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  dweindl

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