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9f91be1
Add balance.c|h
Alomir Feb 3, 2026
7b182f7
Improve do-single-output help
Alomir Feb 3, 2026
0ec16f7
Carbon and nitrogen balance checks
Alomir Feb 3, 2026
2bfd757
Add event fluxes to track system inputs and outputs; add nppStorage p…
Alomir Feb 3, 2026
f6f89d8
Add external writeEvent function, refactor original
Alomir Feb 3, 2026
9aa91fb
Add event for leaf on/off; split woodC into two pools; add balance ch…
Alomir Feb 3, 2026
0c454bf
Updates for balance checks and leaf on/off events
Alomir Feb 3, 2026
ec9b469
Merge branch 'master' into add_carbon_balance_check
Alomir Feb 3, 2026
8ba00eb
Add ability to compare to base
Alomir Feb 3, 2026
b2e26c4
Remove tolerance from balance tracker
Alomir Feb 3, 2026
67028b1
Update col list for niwot
Alomir Feb 3, 2026
13faa6d
Avoid negative zero
Alomir Feb 3, 2026
9211161
Remove negative zeros
Alomir Feb 3, 2026
fee673b
Add test for balance check
Alomir Feb 5, 2026
5b5c64a
Merge branch 'master' into add_carbon_balance_check
Alomir Feb 5, 2026
17da4b6
PR feedback
Alomir Feb 5, 2026
bae820e
Turn off microbes, as it is now broken
Alomir Feb 5, 2026
83afb27
Test updates after balance check updates
Alomir Feb 5, 2026
1aacd4c
Split leaf-on carbon creation into own flux
Alomir Feb 5, 2026
14f6d4a
Fix leafOn flux
Alomir Feb 5, 2026
2a8abae
Updates for leafOn split
Alomir Feb 5, 2026
b38d604
Force skipping russell_4
Alomir Feb 5, 2026
75a44c3
Update for new event fluxes
Alomir Feb 5, 2026
649b35b
Initial plan
Copilot Feb 6, 2026
02f68a4
Fix typos and clarify plantWoodCStorageDelta comment
Copilot Feb 6, 2026
df0257d
Add documentation for carbon balance checks and update CHANGELOG
Copilot Feb 6, 2026
63c6504
Address code review feedback: clarify nppStorage comment and fix bala…
Copilot Feb 6, 2026
f48c49c
Documentation and feedback complete
Copilot Feb 6, 2026
a248978
Add CodeQL build artifacts to .gitignore
Copilot Feb 6, 2026
1a071ee
Update documentation for storage pool, remove Mass Balance section pe…
Copilot Feb 6, 2026
305769d
Remove test output files and fix model-structure.md per review feedback
Copilot Feb 6, 2026
f127f8b
Merge branch 'master' into copilot/sub-pr-248-again
Alomir Feb 6, 2026
c32eb91
Merge branch 'master' into copilot/sub-pr-248-again
Alomir Feb 9, 2026
5a61240
Removed code param reference
Alomir Feb 9, 2026
b7ad6cd
Update C_wood,storage explanation, reformat
Alomir Feb 9, 2026
77f016b
Tweak line-wraps
Alomir Feb 9, 2026
56e2806
Merge branch 'master' into copilot/sub-pr-248-again
Alomir Feb 10, 2026
c0f0ad7
Merge branch 'master' into copilot/sub-pr-248-again
Alomir Feb 13, 2026
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6 changes: 6 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -9,6 +9,8 @@ transpose
.mkdocs.stamp
site/*
site_preview/*
_codeql_build_dir/
_codeql_detected_source_root

# documentation
docs/api
Expand All @@ -22,6 +24,10 @@ tests/sipnet/*/*
!tests/sipnet/*/*.out
!tests/sipnet/*/*.clim
!tests/sipnet/*/*.param
# But exclude generated test outputs
tests/sipnet/*/events.out
tests/sipnet/*/sipnet.out
tests/sipnet/*/sipnet.config

# System-specific files
.DS_Store
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3 changes: 3 additions & 0 deletions docs/CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -40,6 +40,9 @@ sections to include in release notes:
- Organic N handling for fertilization and soil dynamics (#199)
- Dynamic C:N for soil and litter (#214)
- Updates for soil and litter respiration (tillage and C:N effects) (#214)
- Carbon and nitrogen mass balance checks (#248)
- Event tracking for leaf-on and leaf-off phenological transitions (#248)
- Split wood carbon pool into `plantWoodC` and `plantWoodCStorageDelta` to track NPP storage lag (#248)

### Fixed

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