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Merged
merged 139 commits into from
Apr 3, 2023
Merged

V0.23.0 #1162

merged 139 commits into from
Apr 3, 2023

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@jvwong
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@jvwong jvwong commented Apr 3, 2023

  • Updates
    • Regulate image generation rate
    • Image caching invalidates less often
  • Other
    • Neo4j api and tests

lindajiawenli and others added 30 commits February 16, 2023 14:34
@lindajiawenli
init driver test works
2793878
@lindajiawenli
added new query strings to aid with testing
6108a68
@lindajiawenli
integrated initDriver, closeDriver differently for testing
a6f4275
@lindajiawenli
new getter function for articleTitle
d0c4462
@lindajiawenli
Merge branch 'unstable' into testing-neo4j
e8c4f82
@lindajiawenli
fixing merge conflict connect-neo4j.js
8d017b3
@lindajiawenli
deleteAll does not work yet, getNumNodes does
85e0d07
@lindajiawenli
deleteAll (renamed) function now works
0fd067b
@lindajiawenli
put functions only used in testing in a new file
5db09d4
@lindajiawenli
getGeneNameById works, test for addNode now works
4b4cdf1
@lindajiawenli
Merge branch 'unstable' of github.com:PathwayCommons/factoid into tes…
f121575 
…ting-neo4j
@lindajiawenli
starting implementation of addEdge test
f1667eb
@jvwong
Merge pull request #1128 from PathwayCommons/v0.22.1
3be0317 
Update version tag
@lindajiawenli
finished addEdge test. Deleted unnecessary function and query strings
0294d39
@lindajiawenli
checking for duplicates testing completed
496f584
@lindajiawenli
searchByGeneId test completed
cc8f46c
@lindajiawenli
updated addEdge test: formatting
3c02e83
@lindajiawenli
deleteAllNodeandEdges before each test
712b09b
@lindajiawenli
rename getGeneNameById to getGeneName
7aca7b0
@lindajiawenli
made high-level functions related to searchByGeneId
4e16b6c
@lindajiawenli
added test case for searching in an empty database
abdae8b
@lindajiawenli
rename getEdgeById to getEdge
10823db
@jvwong
Add RethinkDB instance.
bdbba97
@lindajiawenli
added comment
0adfce2
@lindajiawenli
documentation
fee908d
@lindajiawenli
made getNode and turned getGeneName into a derivative of getNode
32d81bf
@lindajiawenli
made index.js draft
7a22140
@lindajiawenli
get rid of unused vars
bdd7a0d
@lindajiawenli
Merge pull request #1129 from PathwayCommons/testing-neo4j-v2
13f061f 
Neo4j Testing (Part 2)
@lindajiawenli
make skeleton for addDocumentToNeo4j
2c794f6
lindajiawenli and others added 28 commits March 23, 2023 11:05
@lindajiawenli
begin test suite, bug discovered for test 1
751d9ce
@lindajiawenli
fixed bug for first test case
b532f35
@lindajiawenli
test case 1 added
f8b02a9
@lindajiawenli
test case 2 changed
6021b03
@jvwong
Expire from cache according to time since last edit.
5b38328
@lindajiawenli
add testing function getComplexEdge
18e5054
@lindajiawenli
test case 2 added
2620ae9
@lindajiawenli
test case 3 and 4 changed
d3a29e0
@lindajiawenli
test case 4 changed
e5bbaf3
@lindajiawenli
test case 3 added
b4c8777
@lindajiawenli
test case 4 added
8346f0d
@lindajiawenli
fixed bug with loop conditionals, test case 5 added
fa5eb71
@lindajiawenli
fixed bug in addDocumentToNeo4j, test case 5 added
457264b
@lindajiawenli
rename getComplexEdge to getEdgeByIdAndEndpoints
5338e07
@lindajiawenli
Merge pull request #1150 from PathwayCommons/iss1149-neo4j-testing-co…
28d70a6 
…mplexes

Neo4j: Testing Complexes
@lindajiawenli
remove old complex edge function
f21fbc2
@lindajiawenli
made neighbourhoodWithoutComplexes(id)
ad4967c
@maxkfranz
Merge pull request #1152 from PathwayCommons/iss1151_img-cache
906ce07 
Image cache: Don't load doc
@lindajiawenli
change Molecule to Entity
e9f9db5
@lindajiawenli
test case 1 and test case 5 added
226c484
@lindajiawenli
test case 2 added
eea202f
@lindajiawenli
test cases 3, 4 and 6 added
7543c25
@jvwong
Merge branch 'unstable' into imgspd
f2fb506 
# Conflicts:
#	src/server/routes/api/document/index.js
@jvwong
Merge pull request #1143 from PathwayCommons/imgspd
57cd4b1 
Add controls for max. number of images to generate in parallel
@lindajiawenli
Merge pull request #1154 from PathwayCommons/iss1153-neo4j-filter-com…
3f50da9 
…plexes

Neo4j: Complex filter for neighbourhood()
@jvwong
Ignore file with class fields.
872f46e
@jvwong
Merge pull request #1160 from PathwayCommons/iss1158_ignore-p-limit
73b3452 
Ignore file with class fields.
@jvwong
0.23.0
6c247f7
@jvwong jvwong merged commit e10d418 into master Apr 3, 2023
@jvwong jvwong deleted the v0.23.0 branch April 12, 2023 13:32
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4 participants

@jvwong @lindajiawenli @maxkfranz