Unable to run app in Docker container

[jvwong]

Can no longer seem to run the app in a Docker container. The image builds fine locally and on DockerHub.

Another strange observations is that you can run the production image if you don't have any newly built factoid images on your system, but not if you run the production image after you build locally or use the recent unstable image, it fails in the same way.

To reproduce

• In factoid: $ docker build --no-cache -t pathwaycommons/factoid:local .
• In factoid-docker-config: docker-compose up --no-deps --detach db webapp

Error logs:

2023-10-26 10:34:24 > factoid@0.24.0 start
2023-10-26 10:34:24 > node -r esm ./src/server
2023-10-26 10:34:24 
2023-10-26 10:34:25 /home/appuser/app/node_modules/esm/esm.js:1
2023-10-26 10:34:25 const __global__ = this;(function (require, module, __shared__) { var __shared__;const e=modul
...
Node(),a=this.type===De.incDec;s.operator=this.value,s.prefix=!0,this.next(),s.argume2023-10-26T14:33:39.555040746Z (node:89) DeprecationWarning: Module.chunks: Use Module.forEachChunk/mapChunks/getNumberOfChunks/isInChunk/addChunk/removeChunk instead
2023-10-26 10:33:39 (Use `node --trace-deprecation ...` to show where the warning was created)
...
webapp exited with code 0

[jvwong]

I think this is the offending line (should be crossref):

factoid/src/server/routes/api/document/index.js

Line 68 in 8b6602a

import { findPreprint } from './crossRef/index.js';

I believe on Mac this won't appear as bug, but will on Linux (base image).