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Ensure all datasets convert all floats to ints (where applicable)

data update

Status: Open.

#408 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 25, 2025

 ·  

v2.2

Many Datasets Include Genes that are not in genes.csv

data update

Status: Open.

#407 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 25, 2025

 ·  

v2.2

Update MPNST dataset model type

data update

Status: Open.

#399 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 11, 2025

 ·  

v2.2

HCMI and CPTAC Transcriptomics need to be re-evaluated

bugSomething isn't workingSomething isn't working

data update

Status: Open.

Bug

#397 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2

DepMap Transcriptomics Values are not scaled correctly.

bugSomething isn't workingSomething isn't working

data update

Status: Open.

Bug

#396 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2

Clarify Organoid across all Datasets

data update

Status: Open.

#395 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2

Add latest MPNST Data from Synapse

data update

Status: Open.

#394 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

Some HCMI Samples are missing cancer type

data update

Status: Open.

#393 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2

Missing Cancer types in PancPDO Data - Is this intentional?

bugSomething isn't workingSomething isn't working

data update

questionFurther information is requestedFurther information is requested

Status: Open.

#392 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

Consider methods to annotate 'adjacent normal' tissue

data update

enhancementNew feature or requestNew feature or request

Status: Open.

#369 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Apr 30, 2025

 ·  

v2.2

Remove 2-009 PDX from coderdata

'build' update

data update

Status: Open.

#356 In PNNL-CompBio/coderdata;

· sgosline opened on Apr 14, 2025

 ·  

v2.2

pass drug_descriptors (contains mordred descriptors) to consecutive build runs for datasets

'build' update

bugSomething isn't workingSomething isn't working

data update

Status: Open.

#323 In PNNL-CompBio/coderdata;

· ymahlich opened on Feb 5, 2025

 ·  

v2.2