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<h3>Contents</h3> | ||
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<ul> | ||
<li><a href="{{ pathto('index') }}">Home</a></li> | ||
<li><a href="{{ pathto('getting-started') }}">Get started</a></li> | ||
<li><a href="{{ pathto('how-to/index') }}">How-to guides</a></li> | ||
<li><a href="{{ pathto('reference/index') }}">Reference guide</a></li> | ||
<li><a href="{{ pathto('explanation/index') }}">Explanation</a></li> | ||
<li><a href="{{ pathto('glossary') }}">Glossary</a></li> | ||
</ul> | ||
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<h3>About the project</h3> | ||
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<ul> | ||
<li><a href="{{ pathto('changelog') }}">Changelog</a></li> | ||
<li><a href="{{ pathto('license') }}">License</a></li> | ||
</ul> | ||
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<h3>Useful links</h3> | ||
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<ul> | ||
<li><a href="https://github.com/pgscatalog/pgsc_calc">Github repository</a></li> | ||
<li><a href="https://github.com/pgscatalog/pgsc_calc/issues">Issue tracker</a></li> | ||
</ul> | ||
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<hr> | ||
<a href="{{ pathto('genindex') }}">Index</a> | ||
<hr> |
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:orphan: | ||
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Changelog | ||
--------- | ||
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Versions follow `semantic versioning`_ (``major.minor.patch``). Breaking changes | ||
will only occur in major versions with changes noted in this changelog. | ||
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.. _`semantic versioning`: https://semver.org/ | ||
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pgsc_calc v0.1.3dev (2022-02-04) | ||
-------------------------------- | ||
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Features | ||
~~~~~~~~ | ||
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- Simplified JSON input processes | ||
- Add first draft of documentation | ||
- Add JSON schemas for validating input data (mostly for web platform) | ||
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pgsc_calc v0.1.2dev (2022-01-17) | ||
-------------------------------- | ||
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Features | ||
~~~~~~~~ | ||
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- Add JSON input support for web platform functionality | ||
- Set up simple CI tests with Github actions | ||
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pgsc_calc v0.1.1dev (2021-12-16) | ||
-------------------------------- | ||
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Features | ||
~~~~~~~~ | ||
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- First public release | ||
- Support applying a single scoring file to target genomic data in GrCh37 build |
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Calculating polygenic scores | ||
============================ |
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Good practices for polygenic score analysis | ||
=========================================== |
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Explanation | ||
=========== | ||
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.. toctree:: | ||
:maxdepth: 1 | ||
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calculating | ||
packaging | ||
testing | ||
platform | ||
goodpractices | ||
troubleshooting | ||
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Packaging bioinformatics software with containers | ||
================================================= |
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Building a web platform for polygenic risk score calculation | ||
============================================================ |
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.. _troubleshoot: | ||
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Troubleshooting | ||
=============== | ||
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